Aniseed - Gene card

Gene 'KH2012:KH.C10.272'

Gene Card

Best human hits

FAM213A; FAM213B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001481

Gene Model ID

KH2012:KH.C10.272

Location

KhC10:4652147..4654201

Transcript Models and Sequences

KH2012:KH.C10.272.v1.A.SL1-1
KH2012:KH.C10.272.v1.A.SL2-1
KH2012:KH.C10.272.v1.A.SL3-1

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_009861715.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad061i06

Plate: R1CiGC06e14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
FAM213/AAED1	Pfam	Peroxiredoxin-like FAM213/AAED1
Thioredoxin-like_sf	SUPERFAMILY	Thioredoxin-like superfamily
FAM213/AAED1	PANTHER	Peroxiredoxin-like FAM213/AAED1

GOSlim

11 results

GO Term	Annotation Origin	Type
extracellular region	Blast	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
cytosol	Orthology	cellular component
myelin sheath	Orthology	cellular component
oxidation-reduction process	Orthology	biological process
extracellular exosome	Orthology	cellular component
cellular biosynthetic process	Orthology	biological process
organic substance metabolic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
catalytic activity	Orthology	molecular function

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
prostaglandin biosynthetic process	Hs	biological process
cytoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
cytosol	Hs	cellular component
lipid metabolic process	Hs	biological process
fatty acid metabolic process	Hs	biological process
fatty acid biosynthetic process	Hs	biological process
prostaglandin metabolic process	Hs	biological process
antioxidant activity	Hs	molecular function
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Hs	molecular function
myelin sheath	Hs	cellular component
prostaglandin-F synthase activity	Hs	molecular function
oxidation-reduction process	Hs	biological process
extracellular exosome	Hs	cellular component
cellular oxidant detoxification	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
extracellular region	Hs	cellular component	66.2	2.08e-13
cytoplasm	Hs	cellular component	155	2.93e-47
endoplasmic reticulum	Hs	cellular component	155	2.93e-47
cytosol	Hs	cellular component	155	2.93e-47
antioxidant activity	Hs	molecular function	155	2.93e-47
oxidoreductase activity	Hs	molecular function	155	2.93e-47
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Hs	molecular function	155	2.93e-47
myelin sheath	Hs	cellular component	155	2.93e-47
prostaglandin-F synthase activity	Hs	molecular function	155	2.93e-47
extracellular exosome	Hs	cellular component	155	2.93e-47

GO (InterProScan)