Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005564
NCBI Reference Sequence	NM_001129862.1

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

citb043d11

Plate: R1CiGC33a16

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Znf_CCHC	ProSiteProfiles	Zinc finger, CCHC-type
KH_dom_type_1	Pfam	K Homology domain, type 1
KH_dom_type_1_sf	Gene3D	K Homology domain, type 1 superfamily
KH_dom	SMART	K Homology domain
KH_dom_type_1_sf	SUPERFAMILY	K Homology domain, type 1 superfamily
Znf_CCHC	SMART	Zinc finger, CCHC-type
SF1-HH	Pfam	Splicing factor 1, helix-hairpin domain
BBP/SF1	PANTHER	BBP/SF1 family

GOSlim

24 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
mRNA processing	Orthology	biological process
multicellular organism development	Orthology	biological process
RNA splicing	Orthology	biological process
identical protein binding	Orthology	molecular function
protein heterodimerization activity	Blast	molecular function
mRNA splicing, via spliceosome	Orthology	biological process
zinc ion binding	Orthology	molecular function
transcription corepressor activity	Orthology	molecular function
ribosome	Orthology	cellular component
nuclear body	Orthology	cellular component
metal ion binding	Orthology	molecular function
negative regulation of nucleic acid-templated transcription	Orthology	biological process
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
reproductive process	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
mRNA processing	Hs	biological process
RNA splicing	Hs	biological process
identical protein binding	Hs	molecular function
mRNA splicing, via spliceosome	Hs	biological process
zinc ion binding	Hs	molecular function
pre-mRNA branch point binding	Hs	molecular function
spliceosomal complex assembly	Hs	biological process
mRNA 3'-splice site recognition	Hs	biological process
transcription corepressor activity	Hs	molecular function
spliceosomal complex	Hs	cellular component
ribosome	Hs	cellular component
nuclear body	Hs	cellular component
male sex determination	Hs	biological process
metal ion binding	Hs	molecular function
negative regulation of smooth muscle cell proliferation	Hs	biological process
negative regulation of nucleic acid-templated transcription	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	89.7	2.53e-19
RNA binding	Hs	molecular function	89.7	2.53e-19
mRNA binding	Hs	molecular function	89.7	2.53e-19
protein binding	Hs	molecular function	89.7	2.53e-19
nucleus	Hs	cellular component	89.7	2.53e-19
nucleoplasm	Hs	cellular component	76.6	5.76e-15
cytoplasm	Hs	cellular component	89.7	2.53e-19
poly(A) binding	Hs	molecular function	76.6	5.76e-15
poly(U) RNA binding	Hs	molecular function	76.6	5.76e-15
SH3 domain binding	Hs	molecular function	89.7	2.53e-19
protein domain specific binding	Hs	molecular function	69.3	1.27e-12
SH2 domain binding	Hs	molecular function	76.6	5.76e-15
identical protein binding	Hs	molecular function	76.6	5.76e-15
protein heterodimerization activity	Hs	molecular function	76.6	5.76e-15

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	2.0E-11
RNA binding	PANTHER	molecular function	1.7E-148
mRNA splicing, via spliceosome	PANTHER	biological process	1.7E-148
zinc ion binding	SMART	molecular function	0.0065
pre-mRNA branch point binding	PANTHER	molecular function	1.7E-148

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences