Gene Card
Best human hits
RPL27A
Unique Gene ID
Cirobu.g00001415
Gene Model ID
KH2012:KH.C10.212
Location
KhC10:752593..754358
Transcript Models and Sequences
KH2012:KH.C10.212.v1.A.nonSL2-1
KH2012:KH.C10.212.v1.A.nonSL3-1
KH2012:KH.C10.212.v1.A.nonSL4-1
KH2012:KH.C10.212.v2.A.ND1-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000014933 |
| NCBI Reference Sequence | XM_002125315.4 |
Gateway full ORF
3 results
Gene collection 1 (N. Satoh)
2 results
cilv014e11
Plate: R1CiGC26k15
cilv010l18
Plate: R1CiGC25h12
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ribosomal_L15 | Hamap | Ribosomal protein L15 |
| Ribosomal_L18e/L15P | Pfam | Ribosomal protein L18e/L15P |
| Ribosomal_L15_CS | ProSitePatterns | Ribosomal protein L15, conserved site |
| L18e/L15P_sf | SUPERFAMILY | Ribosomal L18e/L15P superfamily |
GOSlim
13 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| intracellular | Orthology | cellular component |
| endoplasmic reticulum | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| ribosome | Orthology | cellular component |
| translational initiation | Orthology | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Orthology | biological process |
| membrane | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
GO (Orthology)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
| cytoplasmic translation | Hs | biological process |
| RNA binding | Hs | molecular function |
| structural constituent of ribosome | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| endoplasmic reticulum | Hs | cellular component |
| cytosol | Hs | cellular component |
| ribosome | Hs | cellular component |
| rRNA processing | Hs | biological process |
| translation | Hs | biological process |
| translational initiation | Hs | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Hs | biological process |
| large ribosomal subunit | Hs | cellular component |
| membrane | Hs | cellular component |
| cytosolic large ribosomal subunit | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
GO (Blast)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 243 | 3.22e-84 |
| structural constituent of ribosome | Hs | molecular function | 243 | 3.22e-84 |
| protein binding | Hs | molecular function | 243 | 3.22e-84 |
| intracellular | Hs | cellular component | 243 | 3.22e-84 |
| endoplasmic reticulum | Hs | cellular component | 243 | 3.22e-84 |
| cytosol | Hs | cellular component | 243 | 3.22e-84 |
| ribosome | Hs | cellular component | 243 | 3.22e-84 |
| large ribosomal subunit | Hs | cellular component | 243 | 3.22e-84 |
| membrane | Hs | cellular component | 243 | 3.22e-84 |
| cytosolic large ribosomal subunit | Hs | cellular component | 243 | 3.22e-84 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 243 | 3.22e-84 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| structural constituent of ribosome | Hamap | molecular function | 11.168 |
| intracellular | ProSitePatterns | cellular component | |
| ribosome | ProSitePatterns | cellular component | |
| translation | Hamap | biological process | 11.168 |
| large ribosomal subunit | Hamap | cellular component | 11.168 |
