Aniseed - Gene card

Gene 'KH2012:KH.C10.190'

Gene Card

Best human hits

HMCN1; PRSS33; TPSB2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001390

Gene Model ID

KH2012:KH.C10.190

Location

KhC10:3700359..3708535

Transcript Models and Sequences

KH2012:KH.C10.190.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000023472

Collections

Gene collection 1 (N. Satoh)

1 result

ciad007i10

Plate: R1CiGC01p09

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

18 results

IPR Term	Analysis	Definition
TSP1_rpt	SMART	Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf	SUPERFAMILY	Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt	ProSiteProfiles	Thrombospondin type-1 (TSP1) repeat
Peptidase_S1A	PRINTS	Peptidase S1A, chymotrypsin family
TSP1_rpt	Pfam	Thrombospondin type-1 (TSP1) repeat
ShKT_dom	ProSiteProfiles	ShKT domain
cEGF	Pfam	Complement Clr-like EGF domain
Trypsin_dom	SMART	Serine proteases, trypsin domain
EGF_Ca-bd_CS	ProSitePatterns	EGF-like calcium-binding, conserved site
TSP1_rpt_sf	Gene3D	Thrombospondin type-1 (TSP1) repeat superfamily
Peptidase_S1_PA	SUPERFAMILY	Peptidase S1, PA clan
ShKT_dom	SMART	ShKT domain
Trypsin_dom	CDD	Serine proteases, trypsin domain
Trypsin_dom	Pfam	Serine proteases, trypsin domain
ShKT_dom	Pfam	ShKT domain
TRYPSIN_SER	ProSitePatterns	Serine proteases, trypsin family, serine active site
Trypsin_dom	ProSiteProfiles	Serine proteases, trypsin domain
TRYPSIN_HIS	ProSitePatterns	Serine proteases, trypsin family, histidine active site

GOSlim

16 results

GO Term	Annotation Origin	Type
serine-type endopeptidase activity	Blast	molecular function
calcium ion binding	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
cytoplasm	Blast	cellular component
proteolysis	InterProScan	biological process
peptidase activity	Blast	molecular function
serine-type peptidase activity	Blast	molecular function
hydrolase activity	Blast	molecular function
cell junction	Blast	cellular component
extracellular exosome	Blast	cellular component
extracellular region part	Blast	cellular component
cell periphery	Blast	cellular component
cytoplasmic part	Blast	cellular component
plasma membrane region	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
serine-type endopeptidase activity	Hs	molecular function	134	9.63e-35
calcium ion binding	Hs	molecular function	194	8.00e-50
protein binding	Hs	molecular function	130	1.92e-33
extracellular region	Hs	cellular component	194	8.00e-50
proteinaceous extracellular matrix	Hs	cellular component	194	8.00e-50
basement membrane	Hs	cellular component	194	8.00e-50
extracellular space	Hs	cellular component	134	9.63e-35
cytoplasm	Hs	cellular component	194	8.00e-50
cell cortex	Hs	cellular component	194	8.00e-50
peptidase activity	Hs	molecular function	134	9.63e-35
serine-type peptidase activity	Hs	molecular function	134	9.63e-35
hydrolase activity	Hs	molecular function	134	9.63e-35
cell junction	Hs	cellular component	194	8.00e-50
extracellular matrix	Hs	cellular component	194	8.00e-50
cleavage furrow	Hs	cellular component	194	8.00e-50
extracellular exosome	Hs	cellular component	194	8.00e-50

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
serine-type endopeptidase activity	SMART	molecular function	1.1E-72
calcium ion binding	ProSitePatterns	molecular function
proteolysis	SMART	biological process	1.1E-72