Aniseed - Gene card

Gene 'KH2012:KH.C10.19'

Gene Card

Best human hits

DNAH11; DNAH17; DNAH9

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001389

Gene Model ID

KH2012:KH.C10.19

Location

KhC10:2246216..2311312

Transcript Models and Sequences

KH2012:KH.C10.19.v1.A.SL1-1
KH2012:KH.C10.19.v2.A.SL1-1
KH2012:KH.C10.19.v3.A.SL1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005504
NCBI Reference Sequence	XM_018813596.1

Collections

Gene collection 1 (N. Satoh)

2 results

citb084p11

Plate: R1CiGC46h07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
Dynein_HC_stalk	Pfam	Dynein heavy chain, coiled coil stalk
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
DHC_fam	PANTHER	Dynein heavy chain
AAA+_ATPase	SMART	AAA+ ATPase domain
Dynein_heavy_dom-2	Pfam	Dynein heavy chain, domain-2
AAA_6	Pfam	Dynein heavy chain, hydrolytic ATP-binding dynein motor region D1
Dynein_heavy_chain_D4_dom	Pfam	Dynein heavy chain, AAA module D4
Dynein_heavy_dom-1	Pfam	Dynein heavy chain, domain-1
Dynein_heavy_dom	Pfam	Dynein heavy chain domain
DHC_D5	Pfam	Dynein heavy chain, ATP-binding dynein motor region D5
ATPase_dyneun-rel_AAA	Pfam	ATPase, dynein-related, AAA domain

GOSlim

19 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
motor activity	Orthology	molecular function
microtubule motor activity	Orthology	molecular function
ATP binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
cytoskeleton	Orthology	cellular component
microtubule	Orthology	cellular component
microtubule-based movement	Orthology	biological process
cell projection organization	Orthology	biological process
cell projection	Orthology	cellular component
organelle	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell projection part	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
nucleoside-triphosphatase activity	Orthology	molecular function
cytoskeletal part	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
protein binding	Orthology	molecular function

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
cilium movement	Hs	biological process
motor activity	Hs	molecular function
microtubule motor activity	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytoskeleton	Hs	cellular component
microtubule	Hs	cellular component
cilium	Hs	cellular component
axoneme	Hs	cellular component
microtubule-based movement	Hs	biological process
ATP-dependent microtubule motor activity, minus-end-directed	Hs	molecular function
ATPase activity	Hs	molecular function
cell projection organization	Hs	biological process
dynein complex	Hs	cellular component
motile cilium	Hs	cellular component
cell projection	Hs	cellular component
dynein light chain binding	Hs	molecular function
dynein intermediate chain binding	Hs	molecular function
dynein light intermediate chain binding	Hs	molecular function

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleotide binding	Hs	molecular function	6086
motor activity	Hs	molecular function	6086
microtubule motor activity	Hs	molecular function	6086
ATP binding	Hs	molecular function	6086
cytoplasm	Hs	cellular component	6086
cytoskeleton	Hs	cellular component	6086
axonemal dynein complex	Hs	cellular component	5885
microtubule	Hs	cellular component	6086
cilium	Hs	cellular component	6086
axoneme	Hs	cellular component	6086
ATP-dependent microtubule motor activity, minus-end-directed	Hs	molecular function	6086
ATPase activity	Hs	molecular function	6086
dynein complex	Hs	cellular component	6086
motile cilium	Hs	cellular component	6086
cell projection	Hs	cellular component	6086
dynein light chain binding	Hs	molecular function	6086
dynein intermediate chain binding	Hs	molecular function	6086
dynein light intermediate chain binding	Hs	molecular function	6086

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
microtubule motor activity	PANTHER	molecular function	0.0
ATP binding	Pfam	molecular function	6.6E-145
microtubule-based movement	PANTHER	biological process	0.0
ATPase activity	Pfam	molecular function	5.4E-11
dynein complex	Pfam	cellular component	2.4E-236