Aniseed - Gene card

Gene Card

Best human hits

ACP2; ACP6; PXYLP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001358

Gene Model ID

KH2012:KH.C10.159

Location

KhC10:3821385..3824318

Transcript Models and Sequences

KH2012:KH.C10.159.v1.A.ND3-1
KH2012:KH.C10.159.v2.A.ND2-1
KH2012:KH.C10.159.v3.A.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000006309
NCBI Reference Sequence	XM_002126947.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl002j05

Plate: R1CiGC08i18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Acid_Pase_AS	ProSitePatterns	Histidine acid phosphatase active site
His_Pase_clade-2	CDD	Histidine phosphatase superfamily, clade-2
His_PPase_superfam	SUPERFAMILY	Histidine phosphatase superfamily
His_Pase_clade-2	Pfam	Histidine phosphatase superfamily, clade-2
His_PPase_superfam	Gene3D	Histidine phosphatase superfamily

GOSlim

16 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
protein binding	Orthology	molecular function
cytoplasm	Blast	cellular component
mitochondrion	Blast	cellular component
mitochondrial matrix	Blast	cellular component
lysosome	Blast	cellular component
lysosomal membrane	Blast	cellular component
Golgi apparatus	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
dephosphorylation	Orthology	biological process
hydrolase activity	Orthology	molecular function
extracellular exosome	Blast	cellular component
protein metabolic process	Orthology	biological process
vacuolar part	Blast	cellular component
intracellular organelle lumen	Blast	cellular component

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Golgi membrane	Hs	cellular component
protein binding	Hs	molecular function
Golgi apparatus	Hs	cellular component
glycosaminoglycan biosynthetic process	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
dephosphorylation	Hs	biological process
hydrolase activity	Hs	molecular function
phosphatase activity	Hs	molecular function
chondroitin sulfate proteoglycan biosynthetic process	Hs	biological process

GO (Blast)