Aniseed - Gene card

Gene Card

Best human hits

LNPK

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001279

Gene Model ID

KH2012:KH.C1.986

Location

KhC1:6708018..6712715

Transcript Models and Sequences

KH2012:KH.C1.986.v1.A.nonSL2-1
KH2012:KH.C1.986.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004582
NCBI Reference Sequence	XM_002127363.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl041g12

Plate: R1CiGC12d17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
Lunapark_dom	Pfam	Lunapark domain

GOSlim

13 results

GO Term	Annotation Origin	Type
nucleoplasm	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
multicellular organism development	Orthology	biological process
blood coagulation	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
identical protein binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
animal organ development	Orthology	biological process
cell differentiation	Orthology	biological process
organelle organization	Orthology	biological process
endoplasmic reticulum part	Orthology	cellular component

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
multicellular organism development	Hs	biological process
blood coagulation	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
integral component of endoplasmic reticulum membrane	Hs	cellular component
regulation of chondrocyte differentiation	Hs	biological process
identical protein binding	Hs	molecular function
metal ion binding	Hs	molecular function
limb development	Hs	biological process
endoplasmic reticulum tubular network maintenance	Hs	biological process
endoplasmic reticulum tubular network membrane	Hs	cellular component
positive regulation of endoplasmic reticulum tubular network organization	Hs	biological process

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleoplasm	Hs	cellular component	258	3.17e-82
endoplasmic reticulum	Hs	cellular component	258	3.17e-82
endoplasmic reticulum membrane	Hs	cellular component	258	3.17e-82
membrane	Hs	cellular component	258	3.17e-82
integral component of membrane	Hs	cellular component	258	3.17e-82
integral component of endoplasmic reticulum membrane	Hs	cellular component	258	3.17e-82
identical protein binding	Hs	molecular function	258	3.17e-82
metal ion binding	Hs	molecular function	258	3.17e-82
endoplasmic reticulum tubular network membrane	Hs	cellular component	258	3.17e-82

GO (InterProScan)