Aniseed - Gene card

Gene Card

Best human hits

ATP5MC1; ATP5MC2; ATP5MC3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001250

Gene Model ID

KH2012:KH.C1.96

Location

KhC1:914132..915753

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000020929
NCBI Reference Sequence	XM_004225442.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

4 results

ciad079p02

Plate: R1CiGC07l08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
ATP_synth_F0_csu	Hamap	ATP synthase, F0 complex, subunit C
ATP_synth_F0_csu_sf	Gene3D	F1F0 ATP synthase subunit C superfamily
F/V-ATP_Csub_sf	SUPERFAMILY	F/V-ATP synthase subunit C superfamily
ATP_synth_F0_csu	PRINTS	ATP synthase, F0 complex, subunit C
ATP_synth_F0_csu	PANTHER	ATP synthase, F0 complex, subunit C
ATPase_proteolipid_c-like_dom	Pfam	V-ATPase proteolipid subunit C-like domain
ATP_synth_F0_csu_DDCD_BS	ProSitePatterns	ATP synthase, F0 complex, subunit C, DCCD-binding site

GOSlim

21 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
ion transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
mitochondrial membrane	Orthology	cellular component
membrane part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
phosphate-containing compound metabolic process	Orthology	biological process
binding	Orthology	molecular function
transmembrane transport	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
phosphorylation	Orthology	biological process
intracellular transport	Orthology	biological process
intracellular part	Orthology	cellular component

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	Hs	cellular component
transporter activity	Hs	molecular function
protein binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial outer membrane	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial proton-transporting ATP synthase complex	Hs	cellular component
ATP biosynthetic process	Hs	biological process
ion transport	Hs	biological process
lipid binding	Hs	molecular function
hydrogen ion transmembrane transporter activity	Hs	molecular function
ATP synthesis coupled proton transport	Hs	biological process
ATP hydrolysis coupled proton transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
mitochondrial membrane	Hs	cellular component
proton-transporting two-sector ATPase complex, proton-transporting domain	Hs	cellular component
cristae formation	Hs	biological process
mitochondrial ATP synthesis coupled proton transport	Hs	biological process
proton-transporting ATP synthase complex, coupling factor F(o)	Hs	cellular component
proton-transporting ATP synthase activity, rotational mechanism	Hs	molecular function

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	Hs	cellular component	165	5.06e-53
transporter activity	Hs	molecular function	165	5.06e-53
protein binding	Hs	molecular function	157	7.01e-51
mitochondrion	Hs	cellular component	165	5.06e-53
mitochondrial outer membrane	Hs	cellular component	165	5.06e-53
mitochondrial inner membrane	Hs	cellular component	157	7.01e-51
mitochondrial proton-transporting ATP synthase complex	Hs	cellular component	165	5.06e-53
lipid binding	Hs	molecular function	165	5.06e-53
hydrogen ion transmembrane transporter activity	Hs	molecular function	165	5.06e-53
membrane	Hs	cellular component	165	5.06e-53
integral component of membrane	Hs	cellular component	165	5.06e-53
mitochondrial membrane	Hs	cellular component	165	5.06e-53
proton-transporting two-sector ATPase complex, proton-transporting domain	Hs	cellular component	165	5.06e-53
proton-transporting ATP synthase complex, coupling factor F(o)	Hs	cellular component	165	5.06e-53
proton-transporting ATP synthase activity, rotational mechanism	Hs	molecular function	165	5.06e-53

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
hydrogen ion transmembrane transporter activity	PANTHER	molecular function	8.4E-55
ATP synthesis coupled proton transport	PANTHER	biological process	8.4E-55
ATP hydrolysis coupled proton transport	Pfam	biological process	5.1E-12
proton-transporting two-sector ATPase complex, proton-transporting domain	Pfam	cellular component	5.1E-12
proton-transporting ATP synthase complex, coupling factor F(o)	PANTHER	cellular component	8.4E-55