- Gene 'Phfumi.CG.MTP2014.S9...' >
- Gene 'KH2012:KH.C1.959'
Gene Card
Best human hits
HOXA4; HOXB4; HOXC4
Unique Gene ID
Cirobu.g00001249
Gene Model ID
KH2012:KH.C1.959
Location
KhC1:9924112..9931435
Transcript Models and Sequences
External database links
3 results
Gene collection 1 (N. Satoh)
2 results
ciad008a24
Plate: R1CiGC01b22
ciad029a11
Plate: R1CiGC03j21
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Homeobox_metazoa | PRINTS | Homeobox domain, metazoa |
| Homeobox_dom | Pfam | Homeobox domain |
| Homeobox-like_sf | SUPERFAMILY | Homeobox-like domain superfamily |
| Homeobox_CS | ProSitePatterns | Homeobox, conserved site |
| Homeobox_dom | SMART | Homeobox domain |
| Homeobox_dom | ProSiteProfiles | Homeobox domain |
| Homeobox_antennapedia | PRINTS | Homeobox protein, antennapedia type |
| Homeobox_dom | CDD | Homeobox domain |
| Homeobox_Antennapedia_CS | ProSitePatterns | Homeobox protein, antennapedia type, conserved site |
GOSlim
10 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| centrosome | Blast | cellular component |
| regulation of transcription, DNA-templated | InterProScan | biological process |
| nuclear body | Blast | cellular component |
| sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II regulatory region sequence-specific DNA binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II distal enhancer sequence-specific DNA binding | Hs | molecular function | 167 | 4.04e-50 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 167 | 4.04e-50 |
| transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding | Hs | molecular function | 167 | 4.04e-50 |
| DNA binding | Hs | molecular function | 167 | 4.04e-50 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 167 | 4.04e-50 |
| protein binding | Hs | molecular function | 167 | 4.04e-50 |
| nucleus | Hs | cellular component | 167 | 4.04e-50 |
| centrosome | Hs | cellular component | 160 | 2.62e-47 |
| nuclear body | Hs | cellular component | 160 | 6.61e-47 |
| sequence-specific DNA binding | Hs | molecular function | 167 | 4.04e-50 |
| HMG box domain binding | Hs | molecular function | 167 | 4.04e-50 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| DNA binding | SUPERFAMILY | molecular function | 1.75E-26 |
| transcription factor activity, sequence-specific DNA binding | PRINTS | molecular function | 2.0E-5 |
| nucleus | PRINTS | cellular component | 2.0E-5 |
| regulation of transcription, DNA-templated | PRINTS | biological process | 2.0E-5 |
| sequence-specific DNA binding | ProSitePatterns | molecular function |
