Aniseed - Gene card

Gene Card

Best human hits

NAPG

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001236

Gene Model ID

KH2012:KH.C1.947

Location

KhC1:6537725..6539215

Transcript Models and Sequences

KH2012:KH.C1.947.v1.A.nonSL2-1
KH2012:KH.C1.947.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000005620

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl028h21

Plate: R1CiGC11p06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
NSF_attach	PANTHER	NSF attachment protein
TPR_repeat	SMART	Tetratricopeptide repeat
TPR-like_helical_dom_sf	SUPERFAMILY	Tetratricopeptide-like helical domain superfamily

GOSlim

13 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
mitochondrion	Orthology	cellular component
lysosomal membrane	Orthology	cellular component
intracellular protein transport	Orthology	biological process
protein transport	Orthology	biological process
membrane	Orthology	cellular component
myelin sheath	Orthology	cellular component
extracellular exosome	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
membrane part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
membrane organization	Orthology	biological process

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
soluble NSF attachment protein activity	Hs	molecular function
protein binding	Hs	molecular function
intracellular	Hs	cellular component
mitochondrion	Hs	cellular component
lysosomal membrane	Hs	cellular component
intracellular protein transport	Hs	biological process
intra-Golgi vesicle-mediated transport	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
vesicle-mediated transport	Hs	biological process
syntaxin binding	Hs	molecular function
SNARE complex	Hs	cellular component
myelin sheath	Hs	cellular component
protein stabilization	Hs	biological process
membrane fusion	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
soluble NSF attachment protein activity	Hs	molecular function	223	8.86e-71
protein binding	Hs	molecular function	223	8.86e-71
intracellular	Hs	cellular component	223	8.86e-71
mitochondrion	Hs	cellular component	223	8.86e-71
lysosomal membrane	Hs	cellular component	223	8.86e-71
membrane	Hs	cellular component	223	8.86e-71
syntaxin binding	Hs	molecular function	223	8.86e-71
SNARE complex	Hs	cellular component	223	8.86e-71
myelin sheath	Hs	cellular component	223	8.86e-71
extracellular exosome	Hs	cellular component	223	8.86e-71

GO (InterProScan)