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GENE CARD

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Gene Card

Best human hits

SHQ1

Unique Gene ID

Cirobu.g00000902

Gene Model ID

KH2012:KH.C1.644

Location

KhC1:6432109..6434773

Transcript Models and Sequences

  KH2012:KH.C1.644.v1.A.ND1-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

cien35457

Plate: VES75_G23

cien125791

Plate: VES89_L23

Gene collection 1 (N. Satoh)

1 result

cieg009j07

Plate: R1CiGC17c19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
HSP20-like_chaperone Gene3D HSP20-like chaperone
SHQ1 Pfam SHQ1 protein
CS_dom ProSiteProfiles CS domain
HSP20-like_chaperone SUPERFAMILY HSP20-like chaperone

GOSlim

7 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
positive regulation of apoptotic process Orthology biological process
unfolded protein binding Orthology molecular function

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
box H/ACA snoRNP assembly Hs biological process
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
ribonucleoprotein complex assembly Hs biological process
positive regulation of apoptotic process Hs biological process
unfolded protein binding Hs molecular function
positive regulation of telomerase RNA localization to Cajal body Hs biological process

GO (Blast)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 324 1.24e-105
nucleus Hs cellular component 324 1.24e-105
nucleoplasm Hs cellular component 324 1.24e-105
cytoplasm Hs cellular component 324 1.24e-105
cytosol Hs cellular component 324 1.24e-105
unfolded protein binding Hs molecular function 324 1.24e-105

GO (InterProScan)

No result

GO Term Analysis Type e-value