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Gene Card

Best human hits

ZPR1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000791

Gene Model ID

KH2012:KH.C1.542

Location

KhC1:2402340..2407818

Transcript Models and Sequences

  KH2012:KH.C1.542.v1.A.nonSL3-1
KH2012:KH.C1.542.v1.A.nonSL4-1
KH2012:KH.C1.542.v1.A.nonSL6-1
KH2012:KH.C1.542.v1.A.nonSL7-1
KH2012:KH.C1.542.v1.A.SL2-1
KH2012:KH.C1.542.v2.A.nonSL5-1
KH2012:KH.C1.542.v2.A.SL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000009093
NCBI Reference Sequence XM_002129247.3
Collections

Gateway full ORF

2 results

cima862307

Plate: VES64_N24

cien209201

Plate: VES102_P17

Gene collection 1 (N. Satoh)

1 result

cieg040a13

Plate: R1CiGC21l04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Znf_ZPR1 TIGRFAM Zinc finger, ZPR1-type
Znf_ZPR1 SMART Zinc finger, ZPR1-type
Znf_ZPR1 Pfam Zinc finger, ZPR1-type

GOSlim

36 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
mRNA processing Orthology biological process
signal transduction Orthology biological process
zinc ion binding Orthology molecular function
cell proliferation Orthology biological process
RNA splicing Orthology biological process
positive regulation of gene expression Orthology biological process
cell differentiation Orthology biological process
axon Orthology cellular component
cell projection Orthology cellular component
neuronal cell body Orthology cellular component
metal ion binding Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
axon development Orthology biological process
microtubule-based process Orthology biological process
organelle organization Orthology biological process
nuclear body Orthology cellular component
animal organ development Orthology biological process
central nervous system development Orthology biological process
cell projection part Orthology cellular component
receptor binding Orthology molecular function
protein kinase binding Orthology molecular function
nervous system development Orthology biological process
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
DNA replication Orthology biological process
intracellular protein transport Orthology biological process
establishment of protein localization to organelle Orthology biological process
cellular response to organic substance Orthology biological process
anatomical structure development Orthology biological process
apoptotic process Orthology biological process
negative regulation of apoptotic process Orthology biological process

GO (Orthology)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
microtubule cytoskeleton organization Hs biological process
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
mRNA processing Hs biological process
signal transduction Hs biological process
zinc ion binding Hs molecular function
cell proliferation Hs biological process
RNA splicing Hs biological process
positive regulation of gene expression Hs biological process
Cajal body Hs cellular component
spinal cord development Hs biological process
cell differentiation Hs biological process
axon Hs cellular component
growth cone Hs cellular component
Cajal body organization Hs biological process
receptor tyrosine kinase binding Hs molecular function
translation initiation factor binding Hs molecular function
regulation of myelination Hs biological process
SMN complex Hs cellular component
positive regulation of RNA splicing Hs biological process
DNA endoreduplication Hs biological process
positive regulation of protein import into nucleus Hs biological process
cell projection Hs cellular component
neuronal cell body Hs cellular component
perikaryon Hs cellular component
positive regulation of growth Hs biological process
metal ion binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
axon development Hs biological process
cellular response to epidermal growth factor stimulus Hs biological process
Gemini of coiled bodies Hs cellular component
apoptotic process involved in development Hs biological process
negative regulation of motor neuron apoptotic process Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 456 8.47e-159
nucleus Hs cellular component 456 8.47e-159
nucleoplasm Hs cellular component 456 8.47e-159
nucleolus Hs cellular component 456 8.47e-159
cytoplasm Hs cellular component 456 8.47e-159
zinc ion binding Hs molecular function 456 8.47e-159
Cajal body Hs cellular component 456 8.47e-159
axon Hs cellular component 456 8.47e-159
growth cone Hs cellular component 456 8.47e-159
receptor tyrosine kinase binding Hs molecular function 456 8.47e-159
translation initiation factor binding Hs molecular function 456 8.47e-159
SMN complex Hs cellular component 456 8.47e-159
cell projection Hs cellular component 456 8.47e-159
neuronal cell body Hs cellular component 456 8.47e-159
perikaryon Hs cellular component 456 8.47e-159
metal ion binding Hs molecular function 456 8.47e-159
perinuclear region of cytoplasm Hs cellular component 456 8.47e-159
Gemini of coiled bodies Hs cellular component 456 8.47e-159

GO (InterProScan)

1 result

GO Term Analysis Type e-value
zinc ion binding Pfam molecular function 3.1E-25

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