Aniseed - Gene card

Gene 'KH2012:KH.C14.601' >

Gene Card

Best human hits

ITGB1; ITGB6; ITGB7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000754

Gene Model ID

KH2012:KH.C1.508

Location

KhC1:4628922..4651018

Transcript Models and Sequences

KH2012:KH.C1.508.v1.A.SL1-1
KH2012:KH.C1.508.v1.A.SL2-1
KH2012:KH.C1.508.v2.A.SL1-1
KH2012:KH.C1.508.v2.A.SL2-1
KH2012:KH.C1.508.v3.A.SL1-2
KH2012:KH.C1.508.v3.A.SL2-2
KH2012:KH.C1.508.v4.A.SL1-2
KH2012:KH.C1.508.v4.A.SL2-2

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000002989
NCBI Reference Sequence	XR_001974827.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl016c09

Plate: R1CiGC10e14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term	Analysis	Definition
Integrin_bsu	PANTHER	Integrin beta subunit
Integrin_bsu_tail	Pfam	Integrin beta subunit, tail
vWFA_dom_sf	Gene3D	von Willebrand factor A-like domain superfamily
Integrin_bsu_tail	SMART	Integrin beta subunit, tail
Integrin_bsu_tail_dom_sf	SUPERFAMILY	Integrin beta tail domain superfamily
Integrin_bsu	ProSitePatterns	Integrin beta subunit
Integrin_bsu_cyt_dom	SMART	Integrin beta subunit, cytoplasmic domain
Integrin_bsu	PRINTS	Integrin beta subunit
Integrin_bsu_VWA	SMART	Integrin beta subunit, VWA domain
Integrin_bsu	PIRSF	Integrin beta subunit
Integrin_bsu_cyt_dom	Pfam	Integrin beta subunit, cytoplasmic domain
vWFA_dom_sf	SUPERFAMILY	von Willebrand factor A-like domain superfamily
Integrin_dom_sf	SUPERFAMILY	Integrin domain superfamily
Integrin_bsu_VWA	Pfam	Integrin beta subunit, VWA domain
Integrin_beta_N	Pfam	Integrin beta N-terminal

GOSlim

92 results

GO Term	Annotation Origin	Type
G1/S transition of mitotic cell cycle	Orthology	biological process
actin binding	Orthology	molecular function
integrin binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
endosome	Orthology	cellular component
centrosome	Blast	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Orthology	cellular component
cell adhesion	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
cell surface	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cell migration	Orthology	biological process
cytokine-mediated signaling pathway	Orthology	biological process
lamellipodium	Orthology	cellular component
cell junction	Orthology	cellular component
extracellular matrix organization	Orthology	biological process
neuron projection development	Orthology	biological process
cytoplasmic vesicle	Orthology	cellular component
melanosome	Orthology	cellular component
cell projection	Orthology	cellular component
positive regulation of apoptotic process	Orthology	biological process
positive regulation of GTPase activity	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
membrane raft	Orthology	cellular component
synapse	Orthology	cellular component
metal ion binding	Orthology	molecular function
protein heterodimerization activity	Orthology	molecular function
perinuclear region of cytoplasm	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
synaptic membrane	Orthology	cellular component
apoptotic process	Orthology	biological process
cell-cell signaling	Orthology	biological process
protein kinase binding	Orthology	molecular function
extracellular vesicle	Orthology	cellular component
binding	Orthology	molecular function
cell differentiation	Orthology	biological process
plasma membrane region	Orthology	cellular component
cell leading edge	Orthology	cellular component
enzyme binding	Orthology	molecular function
angiogenesis	Orthology	biological process
defense response	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
integral component of plasma membrane	Orthology	cellular component
macromolecular complex	Orthology	cellular component
gamete generation	Orthology	biological process
nervous system process	Orthology	biological process
plasma membrane part	Orthology	cellular component
signaling receptor activity	Orthology	molecular function
brain development	Orthology	biological process
cell morphogenesis involved in differentiation	Orthology	biological process
cytoskeletal part	Orthology	cellular component
immune system process	Orthology	biological process
animal organ development	Orthology	biological process
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
cell projection membrane	Orthology	cellular component
small GTPase mediated signal transduction	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
myelin sheath	Orthology	cellular component
protein localization to membrane	Orthology	biological process
postsynapse	Orthology	cellular component
cell development	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process
multicellular organism development	Orthology	biological process
axonogenesis	Orthology	biological process
heart development	Orthology	biological process
cell morphogenesis involved in neuron differentiation	Orthology	biological process
neuron projection morphogenesis	Orthology	biological process
immune response	Orthology	biological process
cell cycle	Orthology	biological process
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
regulation of signal transduction	Orthology	biological process
developmental process	Orthology	biological process
cell morphogenesis	Orthology	biological process
transmembrane signaling receptor activity	Orthology	molecular function
chemotaxis	Orthology	biological process
signal transduction	Orthology	biological process
innate immune response	Orthology	biological process
whole membrane	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
endomembrane system	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
regulation of cellular metabolic process	Orthology	biological process
protein phosphorylation	Orthology	biological process
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
cytoplasmic part	Orthology	cellular component

GO (Orthology)

128 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G1/S transition of mitotic cell cycle	Hs	biological process
virus receptor activity	Hs	molecular function
cell fate specification	Hs	biological process
ruffle	Hs	cellular component
fibronectin binding	Hs	molecular function
protease binding	Hs	molecular function
cell migration involved in sprouting angiogenesis	Hs	biological process
actin binding	Hs	molecular function
receptor activity	Hs	molecular function
integrin binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
inflammatory response	Hs	biological process
cellular defense response	Hs	biological process
cell adhesion	Hs	biological process
homophilic cell adhesion via plasma membrane adhesion molecules	Hs	biological process
cell-matrix adhesion	Hs	biological process
integrin-mediated signaling pathway	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
integrin complex	Hs	cellular component
germ cell migration	Hs	biological process
visual learning	Hs	biological process
external side of plasma membrane	Hs	cellular component
cell surface	Hs	cellular component
intercalated disc	Hs	cellular component
coreceptor activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
viral process	Hs	biological process
cell migration	Hs	biological process
cytokine-mediated signaling pathway	Hs	biological process
C-X3-C chemokine binding	Hs	molecular function
formation of radial glial scaffolds	Hs	biological process
lamellipodium	Hs	cellular component
cell junction	Hs	cellular component
filopodium	Hs	cellular component
B cell differentiation	Hs	biological process
extracellular matrix organization	Hs	biological process
neuron projection development	Hs	biological process
cytoplasmic vesicle	Hs	cellular component
cell-substrate adhesion	Hs	biological process
neuromuscular junction	Hs	cellular component
receptor internalization	Hs	biological process
cleavage furrow	Hs	cellular component
ruffle membrane	Hs	cellular component
cell adhesion mediated by integrin	Hs	biological process
cell-cell adhesion mediated by integrin	Hs	biological process
substrate adhesion-dependent cell spreading	Hs	biological process
integrin alpha1-beta1 complex	Hs	cellular component
integrin alpha2-beta1 complex	Hs	cellular component
integrin alpha3-beta1 complex	Hs	cellular component
integrin alpha4-beta7 complex	Hs	cellular component
integrin alpha7-beta1 complex	Hs	cellular component
integrin alpha8-beta1 complex	Hs	cellular component
integrin alpha10-beta1 complex	Hs	cellular component
integrin alpha11-beta1 complex	Hs	cellular component
negative regulation of Rho protein signal transduction	Hs	biological process
myelin sheath abaxonal region	Hs	cellular component
sarcolemma	Hs	cellular component
melanosome	Hs	cellular component
cell projection	Hs	cellular component
positive regulation of apoptotic process	Hs	biological process
receptor clustering	Hs	biological process
dendritic spine	Hs	cellular component
receptor complex	Hs	cellular component
laminin binding	Hs	molecular function
positive regulation of GTPase activity	Hs	biological process
macromolecular complex binding	Hs	molecular function
membrane raft	Hs	cellular component
synapse	Hs	cellular component
sarcomere organization	Hs	biological process
cadherin binding	Hs	molecular function
negative regulation of cell differentiation	Hs	biological process
positive regulation of angiogenesis	Hs	biological process
viral entry into host cell	Hs	biological process
metal ion binding	Hs	molecular function
protein heterodimerization activity	Hs	molecular function
mesodermal cell differentiation	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component
axon extension	Hs	biological process
cardiac muscle tissue development	Hs	biological process
dendrite morphogenesis	Hs	biological process
regulation of immune response	Hs	biological process
cell adhesion molecule binding	Hs	molecular function
leukocyte migration	Hs	biological process
regulation of cell cycle	Hs	biological process
positive regulation of protein kinase B signaling	Hs	biological process
cardiac muscle cell differentiation	Hs	biological process
recycling endosome	Hs	cellular component
extracellular exosome	Hs	cellular component
invadopodium membrane	Hs	cellular component
basement membrane organization	Hs	biological process
synaptic membrane	Hs	cellular component
collagen binding involved in cell-matrix adhesion	Hs	molecular function
positive regulation of protein localization to plasma membrane	Hs	biological process
positive regulation of receptor activity	Hs	biological process
amyloid-beta binding	Hs	molecular function
complement component C3b binding	Hs	molecular function
leukocyte migration involved in inflammatory response	Hs	biological process
phagocytosis	Hs	biological process
phagocytosis, engulfment	Hs	biological process
apoptotic process	Hs	biological process
cell-cell signaling	Hs	biological process
aging	Hs	biological process
regulation of cell shape	Hs	biological process
protein kinase binding	Hs	molecular function
ICAM-3 receptor activity	Hs	molecular function
neutrophil chemotaxis	Hs	biological process
heat shock protein binding	Hs	molecular function
toll-like receptor 4 signaling pathway	Hs	biological process
integrin alphaL-beta2 complex	Hs	cellular component
integrin alphaM-beta2 complex	Hs	cellular component
specific granule membrane	Hs	cellular component
endodermal cell differentiation	Hs	biological process
endothelial cell migration	Hs	biological process
plasma membrane raft	Hs	cellular component
positive regulation of nitric oxide biosynthetic process	Hs	biological process
regulation of peptidyl-tyrosine phosphorylation	Hs	biological process
positive regulation of NF-kappaB transcription factor activity	Hs	biological process
tertiary granule membrane	Hs	cellular component
cell-cell adhesion	Hs	biological process
cytoplasmic region	Hs	cellular component
ficolin-1-rich granule membrane	Hs	cellular component
extracellular vesicle	Hs	cellular component
neutrophil migration	Hs	biological process

GO (Blast)

58 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
virus receptor activity	Hs	molecular function	576	0.0
ruffle	Hs	cellular component	576	0.0
fibronectin binding	Hs	molecular function	576	0.0
protease binding	Hs	molecular function	576	0.0
actin binding	Hs	molecular function	576	0.0
receptor activity	Hs	molecular function	576	0.0
integrin binding	Hs	molecular function	576	0.0
protein binding	Hs	molecular function	576	0.0
nucleoplasm	Hs	cellular component	523	3.33e-175
cytoplasm	Hs	cellular component	576	0.0
endosome	Hs	cellular component	576	0.0
centrosome	Hs	cellular component	523	3.33e-175
plasma membrane	Hs	cellular component	576	0.0
focal adhesion	Hs	cellular component	576	0.0
integrin complex	Hs	cellular component	576	0.0
external side of plasma membrane	Hs	cellular component	576	0.0
cell surface	Hs	cellular component	576	0.0
intercalated disc	Hs	cellular component	576	0.0
coreceptor activity	Hs	molecular function	576	0.0
membrane	Hs	cellular component	576	0.0
integral component of membrane	Hs	cellular component	576	0.0
C-X3-C chemokine binding	Hs	molecular function	576	0.0
lamellipodium	Hs	cellular component	576	0.0
cell junction	Hs	cellular component	576	0.0
filopodium	Hs	cellular component	576	0.0
cytoplasmic vesicle	Hs	cellular component	576	0.0
neuromuscular junction	Hs	cellular component	576	0.0
cleavage furrow	Hs	cellular component	576	0.0
ruffle membrane	Hs	cellular component	576	0.0
integrin alpha1-beta1 complex	Hs	cellular component	576	0.0
integrin alpha2-beta1 complex	Hs	cellular component	576	0.0
integrin alpha3-beta1 complex	Hs	cellular component	576	0.0
integrin alpha4-beta7 complex	Hs	cellular component	540	0.0
integrin alpha7-beta1 complex	Hs	cellular component	576	0.0
integrin alpha8-beta1 complex	Hs	cellular component	576	0.0
integrin alpha10-beta1 complex	Hs	cellular component	576	0.0
integrin alpha11-beta1 complex	Hs	cellular component	576	0.0
integrin alphav-beta6 complex	Hs	cellular component	523	3.33e-175
myelin sheath abaxonal region	Hs	cellular component	576	0.0
sarcolemma	Hs	cellular component	576	0.0
melanosome	Hs	cellular component	576	0.0
cell projection	Hs	cellular component	576	0.0
dendritic spine	Hs	cellular component	576	0.0
receptor complex	Hs	cellular component	576	0.0
laminin binding	Hs	molecular function	576	0.0
macromolecular complex binding	Hs	molecular function	576	0.0
membrane raft	Hs	cellular component	576	0.0
synapse	Hs	cellular component	576	0.0
cadherin binding	Hs	molecular function	576	0.0
metal ion binding	Hs	molecular function	576	0.0
protein heterodimerization activity	Hs	molecular function	576	0.0
perinuclear region of cytoplasm	Hs	cellular component	576	0.0
cell adhesion molecule binding	Hs	molecular function	576	0.0
recycling endosome	Hs	cellular component	576	0.0
extracellular exosome	Hs	cellular component	576	0.0
invadopodium membrane	Hs	cellular component	576	0.0
synaptic membrane	Hs	cellular component	576	0.0
collagen binding involved in cell-matrix adhesion	Hs	molecular function	576	0.0

GO (InterProScan)