Login
Help

GENE CARD

Submit your Data

  1. Gene 'KH2012:KH.C1.498'

Gene Card

Best human hits

CHAT; CPT2; CRAT

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000742

Gene Model ID

KH2012:KH.C1.498

Location

KhC1:4517061..4531721

Transcript Models and Sequences

  KH2012:KH.C1.498.v1.A.SL1-1
KH2012:KH.C1.498.v2.A.SL1-2

External Database Gene Card

External database links

4 results

Database Gene ID
ENSEMBL ENSCING00000002569
ENSEMBL ENSCING00000002571
NCBI Reference Sequence NM_001032449.1
NCBI Reference Sequence NM_001032789.1
Collections

Gene collection 1 (N. Satoh)

1 result

ciad094n13

Plate: R1CiGC37m03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

5 results

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

No Phylogeny Tree for this Gene.
Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
MFS_trans_sf SUPERFAMILY MFS transporter superfamily
MFS_dom ProSiteProfiles Major facilitator superfamily domain
MFS Pfam Major facilitator superfamily
MFS_dom CDD Major facilitator superfamily domain
Carn_acyl_trans ProSitePatterns Acyltransferase ChoActase/COT/CPT
Carn_acyl_trans Pfam Acyltransferase ChoActase/COT/CPT
Carn_acyl_trans PANTHER Acyltransferase ChoActase/COT/CPT

GOSlim

19 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
mitochondrial inner membrane Blast cellular component
peroxisome Blast cellular component
endoplasmic reticulum Blast cellular component
cytosol Blast cellular component
membrane Blast cellular component
transferase activity Blast molecular function
synapse Blast cellular component
integral component of membrane InterProScan cellular component
transmembrane transport InterProScan biological process
intracellular organelle part Blast cellular component
intracellular organelle lumen Blast cellular component
synapse part Blast cellular component
neuron part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
carnitine O-acetyltransferase activity Hs molecular function 452 2.82e-150
carnitine O-palmitoyltransferase activity Hs molecular function 255 8.69e-75
choline O-acetyltransferase activity Hs molecular function 598 0.0
receptor binding Hs molecular function 452 2.82e-150
nucleus Hs cellular component 598 0.0
nucleoplasm Hs cellular component 255 8.69e-75
nucleolus Hs cellular component 255 8.69e-75
cytoplasm Hs cellular component 598 0.0
mitochondrion Hs cellular component 452 2.82e-150
mitochondrial inner membrane Hs cellular component 452 2.82e-150
peroxisome Hs cellular component 452 2.82e-150
peroxisomal matrix Hs cellular component 452 2.82e-150
endoplasmic reticulum Hs cellular component 452 2.82e-150
cytosol Hs cellular component 598 0.0
membrane Hs cellular component 452 2.82e-150
transferase activity Hs molecular function 598 0.0
transferase activity, transferring acyl groups Hs molecular function 598 0.0
synapse Hs cellular component 598 0.0
presynapse Hs cellular component 598 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
transferase activity, transferring acyl groups PANTHER molecular function 2.7E-285
integral component of membrane Pfam cellular component 2.8E-41
transmembrane transport Pfam biological process 2.8E-41

Back to Top