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GENE CARD

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  1. Gene 'KH2012:KH.C6.118'
  2. Gene 'KH2012:KH.C1.431'

Gene Card

Best human hits

ZNF563; ZNF597; ZNF790

Unique Gene ID

Cirobu.g00000672

Gene Model ID

KH2012:KH.C1.431

Location

KhC1:4147763..4148659

Transcript Models and Sequences

  KH2012:KH.C1.431.v1.A.ND1-1

External Database Gene Card

External database links

No result

Collections

Gene collection 1 (N. Satoh)

1 result

ciad058d10

Plate: R1CiGC06a09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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No Phylogeny Tree for this Gene.
Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type

GOSlim

6 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
metal ion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 49.7 5.95e-07
DNA binding Hs molecular function 49.7 5.95e-07
transcription factor activity, sequence-specific DNA binding Hs molecular function 47.8 2.77e-06
intracellular Hs cellular component 49.7 5.95e-07
nucleus Hs cellular component 49.7 5.95e-07
metal ion binding Hs molecular function 49.7 5.95e-07

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.046