Aniseed - Gene card

Gene Card

Best human hits

ARIH2; RNF144A; RNF144B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000665

Gene Model ID

KH2012:KH.C1.425

Location

KhC1:3196769..3204397

Transcript Models and Sequences

KH2012:KH.C1.425.v1.A.SL1-1
KH2012:KH.C1.425.v1.A.SL2-1
KH2012:KH.C1.425.v1.A.SL3-1
KH2012:KH.C1.425.v1.A.SL5-1
KH2012:KH.C1.425.v2.A.ND4-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000013725
NCBI Reference Sequence	XM_002125108.4
NCBI Reference Sequence	XM_009863901.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl033b02

Plate: R1CiGC39i05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Znf_RING	SMART	Zinc finger, RING-type
Znf_RING_CS	ProSitePatterns	Zinc finger, RING-type, conserved site
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Znf_RING	ProSiteProfiles	Zinc finger, RING-type
IBR_dom	Pfam	IBR domain
E3_UB_ligase_RBR	PANTHER	E3 ubiquitin ligase RBR family
IBR_dom	SMART	IBR domain

GOSlim

30 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
apoptotic process	Orthology	biological process
zinc ion binding	Blast	molecular function
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
cytoplasmic vesicle	Orthology	cellular component
mitochondrial membrane	Orthology	cellular component
negative regulation of apoptotic process	Orthology	biological process
intracellular membrane-bounded organelle	Orthology	cellular component
metal ion binding	Orthology	molecular function
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
proteolysis	Orthology	biological process
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
endosome	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
organelle membrane	Orthology	cellular component
enzyme binding	Orthology	molecular function

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ubiquitin ligase complex	Hs	cellular component
protein polyubiquitination	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
ubiquitin-dependent protein catabolic process	Hs	biological process
apoptotic process	Hs	biological process
endosome membrane	Hs	cellular component
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
cytoplasmic vesicle membrane	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
ubiquitin conjugating enzyme binding	Hs	molecular function
mitochondrial membrane	Hs	cellular component
positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
intracellular membrane-bounded organelle	Hs	cellular component
metal ion binding	Hs	molecular function
ubiquitin protein ligase activity	Hs	molecular function

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	266	1.64e-87
ubiquitin-protein transferase activity	Hs	molecular function	266	1.64e-87
protein binding	Hs	molecular function	250	6.11e-81
nucleus	Hs	cellular component	82.0	6.72e-17
nucleoplasm	Hs	cellular component	82.0	6.72e-17
cytoplasm	Hs	cellular component	250	6.11e-81
mitochondrion	Hs	cellular component	250	6.11e-81
Golgi apparatus	Hs	cellular component	266	1.64e-87
cytosol	Hs	cellular component	250	6.11e-81
plasma membrane	Hs	cellular component	266	1.64e-87
zinc ion binding	Hs	molecular function	82.0	6.72e-17
endosome membrane	Hs	cellular component	266	1.64e-87
membrane	Hs	cellular component	266	1.64e-87
integral component of membrane	Hs	cellular component	266	1.64e-87
transferase activity	Hs	molecular function	266	1.64e-87
cytoplasmic vesicle membrane	Hs	cellular component	266	1.64e-87
cytoplasmic vesicle	Hs	cellular component	266	1.64e-87
Cul5-RING ubiquitin ligase complex	Hs	cellular component	82.0	6.72e-17
ubiquitin conjugating enzyme binding	Hs	molecular function	266	1.64e-87
mitochondrial membrane	Hs	cellular component	250	6.11e-81
intracellular membrane-bounded organelle	Hs	cellular component	266	1.64e-87
metal ion binding	Hs	molecular function	266	1.64e-87
ubiquitin protein ligase activity	Hs	molecular function	266	1.64e-87

GO (InterProScan)