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GENE CARD

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  1. Gene 'KH2012:KH.C1.403'

Gene Card

Best human hits

HIST1H2BC; HIST1H2BD; HIST1H2BL

Unique Gene ID

Cirobu.g00000641

Gene Model ID

KH2012:KH.C1.403

Location

KhC1:102842..103248

Transcript Models and Sequences

  KH2012:KH.C1.403.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Collections

Gene collection 1 (N. Satoh)

1 result

cits042f11

Plate: R1CiGC35k06

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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No Phylogeny Tree for this Gene.
Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Histone_H2B SMART Histone H2B
Histone_H2B PANTHER Histone H2B
Histone-fold Gene3D Histone-fold
Histone-fold SUPERFAMILY Histone-fold
Histone_H2B PRINTS Histone H2B
Histone_H2A/H2B/H3 Pfam Histone H2A/H2B/H3

GOSlim

12 results

GO Term Annotation Origin Type
DNA binding Blast molecular function
protein binding Blast molecular function
extracellular space Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytosol Blast cellular component
identical protein binding Blast molecular function
protein heterodimerization activity Blast molecular function
extracellular exosome Blast cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleosome Hs cellular component 100 2.26e-28
DNA binding Hs molecular function 100 2.26e-28
protein binding Hs molecular function 99.4 5.18e-28
extracellular space Hs cellular component 99.4 5.18e-28
nucleus Hs cellular component 100 2.26e-28
nucleoplasm Hs cellular component 100 2.26e-28
chromosome Hs cellular component 100 2.26e-28
cytosol Hs cellular component 100 2.26e-28
identical protein binding Hs molecular function 99.4 5.18e-28
protein heterodimerization activity Hs molecular function 100 2.26e-28
extracellular exosome Hs cellular component 100 2.26e-28

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleosome PANTHER cellular component 1.3E-32
DNA binding PANTHER molecular function 1.3E-32
protein heterodimerization activity Gene3D molecular function 2.0E-35