Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

RNF13; RNF167; ZNRF4

Unique Gene ID

Cirobu.g00000639

Gene Model ID

KH2012:KH.C1.401

Location

KhC1:8081714..8092374

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

1 result

cien103868

Plate: VES86_A14

Gene collection 1 (N. Satoh)

1 result

cicl041i02

Plate: R1CiGC12f09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
PA_domain Pfam PA domain
Znf_RING Pfam Zinc finger, RING-type
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING SMART Zinc finger, RING-type
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING-CH SMART Zinc finger, RING-CH-type

GOSlim

25 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
lysosome Blast cellular component
lysosomal membrane Blast cellular component
endosome Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
zinc ion binding Blast molecular function
endomembrane system Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
transferase activity Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Blast molecular function
organelle inner membrane Blast cellular component
nuclear membrane Blast cellular component
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 239 6.09e-75
ubiquitin-protein transferase activity Hs molecular function 239 6.09e-75
protein binding Hs molecular function 239 6.09e-75
nucleus Hs cellular component 239 6.09e-75
nuclear inner membrane Hs cellular component 239 6.09e-75
nucleoplasm Hs cellular component 239 6.09e-75
cytoplasm Hs cellular component 226 1.78e-70
lysosome Hs cellular component 239 6.09e-75
lysosomal membrane Hs cellular component 239 6.09e-75
endosome Hs cellular component 239 6.09e-75
endoplasmic reticulum Hs cellular component 239 6.09e-75
endoplasmic reticulum membrane Hs cellular component 239 6.09e-75
Golgi apparatus Hs cellular component 239 6.09e-75
cytosol Hs cellular component 239 6.09e-75
zinc ion binding Hs molecular function 226 1.78e-70
endomembrane system Hs cellular component 226 1.78e-70
membrane Hs cellular component 239 6.09e-75
integral component of membrane Hs cellular component 239 6.09e-75
transferase activity Hs molecular function 239 6.09e-75
late endosome membrane Hs cellular component 239 6.09e-75
intracellular membrane-bounded organelle Hs cellular component 239 6.09e-75
metal ion binding Hs molecular function 239 6.09e-75
ubiquitin protein ligase activity Hs molecular function 239 6.09e-75

GO (InterProScan)

1 result

GO Term Analysis Type e-value
zinc ion binding SMART molecular function 0.0076