Aniseed - Gene card

Gene Card

Best human hits

AF241726.2; TSPAN6; TSPAN7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000294

Gene Model ID

KH2012:KH.C1.1265

Location

KhC1:5590797..5593860

Transcript Models and Sequences

KH2012:KH.C1.1265.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000007815
NCBI Reference Sequence	XM_002120239.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad025k23

Plate: R1CiGC03e02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Tetraspanin	PRINTS	Tetraspanin
Tetraspanin_EC2_sf	Gene3D	Tetraspanin, EC2 domain superfamily
Tetraspanin_EC2_sf	SUPERFAMILY	Tetraspanin, EC2 domain superfamily
Tetraspanin	PIRSF	Tetraspanin
Tetraspanin/Peripherin	Pfam	Tetraspanin/Peripherin
Tetraspanin_CS	ProSitePatterns	Tetraspanin, conserved site

GOSlim

13 results

GO Term	Annotation Origin	Type
signal transducer activity	Orthology	molecular function
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
extracellular exosome	Orthology	cellular component
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
signal transducer activity	Hs	molecular function
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
cell surface receptor signaling pathway	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
viral process	Hs	biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
extracellular exosome	Hs	cellular component
negative regulation of NIK/NF-kappaB signaling	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
signal transducer activity	Hs	molecular function	183	2.27e-57
calcium ion binding	Hs	molecular function	167	9.72e-51
protein binding	Hs	molecular function	183	2.27e-57
extracellular region	Hs	cellular component	167	9.72e-51
integral component of plasma membrane	Hs	cellular component	191	2.51e-60
membrane	Hs	cellular component	191	2.51e-60
integral component of membrane	Hs	cellular component	191	2.51e-60
extracellular exosome	Hs	cellular component	183	2.27e-57

GO (InterProScan)