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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...' > 
  2. Gene 'Phmamm.CG.MTP2014.S1...' > 
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Gene Card

Best human hits

DMBX1; DRGX; PITX3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000237

Gene Model ID

KH2012:KH.C1.1212

Location

KhC1:9792942..9797062

Transcript Models and Sequences

  KH2012:KH.C1.1212.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000007001
NCBI Reference Sequence XM_002119104.2
Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

4 results

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Homeobox_dom ProSiteProfiles Homeobox domain
Homeobox_dom Pfam Homeobox domain
Homeobox_dom SMART Homeobox domain
Homeobox_dom CDD Homeobox domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_CS ProSitePatterns Homeobox, conserved site

GOSlim

20 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
RNA polymerase II regulatory region sequence-specific DNA binding Orthology molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
DNA binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
nucleus Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
multicellular organism development Orthology biological process
central nervous system development Orthology biological process
brain development Orthology biological process
protein homodimerization activity Orthology molecular function
neuronal cell body Blast cellular component
sequence-specific DNA binding Orthology molecular function
negative regulation of transcription, DNA-templated Orthology biological process
protein heterodimerization activity Orthology molecular function
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
developmental process Orthology biological process

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
nucleus Hs cellular component
transcription factor complex Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
multicellular organism development Hs biological process
central nervous system development Hs biological process
brain development Hs biological process
adult feeding behavior Hs biological process
adult locomotory behavior Hs biological process
protein homodimerization activity Hs molecular function
sequence-specific DNA binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
protein heterodimerization activity Hs molecular function
developmental growth Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 109 4.22e-28
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 93.2 1.72e-22
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 109 4.22e-28
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 93.2 1.72e-22
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 109 4.22e-28
DNA binding Hs molecular function 109 4.22e-28
transcription factor activity, sequence-specific DNA binding Hs molecular function 109 4.22e-28
nucleus Hs cellular component 109 4.22e-28
transcription factor complex Hs cellular component 109 4.22e-28
protein homodimerization activity Hs molecular function 109 4.22e-28
neuronal cell body Hs cellular component 93.2 1.72e-22
sequence-specific DNA binding Hs molecular function 109 4.22e-28
protein heterodimerization activity Hs molecular function 109 4.22e-28

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding SMART molecular function 7.5E-25
regulation of transcription, DNA-templated ProSitePatterns biological process
sequence-specific DNA binding ProSitePatterns molecular function

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