Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000007764

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad012k13

Plate: R1CiGC02c14

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
ALKBH3	PANTHER	Alkylated DNA repair protein alkB homologue 3
AlkB-like_sf	Gene3D	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Oxoglu/Fe-dep_dioxygenase	ProSiteProfiles	Oxoglutarate/iron-dependent dioxygenase
AlkB-like	Pfam	Alpha-ketoglutarate-dependent dioxygenase AlkB-like

GOSlim

24 results

GO Term	Annotation Origin	Type
actin binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
cytosol	Orthology	cellular component
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
cell proliferation	Orthology	biological process
microtubule cytoskeleton	Blast	cellular component
midbody	Blast	cellular component
metal ion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
iron ion binding	Orthology	molecular function
catalytic activity	Orthology	molecular function
small molecule binding	Orthology	molecular function
anion binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function
DNA metabolic process	Orthology	biological process
RNA metabolic process	Orthology	biological process
metabolic process	Blast	biological process
hydrolase activity	Blast	molecular function
cell part	Blast	cellular component

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
DNA repair	Hs	biological process
DNA dealkylation involved in DNA repair	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
ferrous iron binding	Hs	molecular function
cell proliferation	Hs	biological process
oxidoreductase activity	Hs	molecular function
L-ascorbic acid binding	Hs	molecular function
oxidative single-stranded DNA demethylation	Hs	biological process
oxidative single-stranded RNA demethylation	Hs	biological process
DNA-N1-methyladenine dioxygenase activity	Hs	molecular function
metal ion binding	Hs	molecular function
dioxygenase activity	Hs	molecular function
oxidation-reduction process	Hs	biological process
RNA N1-methyladenosine dioxygenase activity	Hs	molecular function

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
actin binding	Hs	molecular function	38.5	0.003
protein binding	Hs	molecular function	256	6.33e-85
nucleus	Hs	cellular component	256	6.33e-85
nucleoplasm	Hs	cellular component	256	6.33e-85
cytoplasm	Hs	cellular component	256	6.33e-85
mitochondrion	Hs	cellular component	256	6.33e-85
cytosol	Hs	cellular component	256	6.33e-85
ferrous iron binding	Hs	molecular function	256	6.33e-85
microtubule cytoskeleton	Hs	cellular component	106	2.08e-27
oxidoreductase activity	Hs	molecular function	256	6.33e-85
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	Hs	molecular function	106	2.08e-27
midbody	Hs	cellular component	38.5	0.003
L-ascorbic acid binding	Hs	molecular function	256	6.33e-85
demethylase activity	Hs	molecular function	38.5	0.003
DNA-N1-methyladenine dioxygenase activity	Hs	molecular function	256	6.33e-85
metal ion binding	Hs	molecular function	256	6.33e-85
dioxygenase activity	Hs	molecular function	256	6.33e-85
cytosine C-5 DNA demethylase activity	Hs	molecular function	106	2.08e-27
contractile ring	Hs	cellular component	38.5	0.003
1-ethyladenine demethylase activity	Hs	molecular function	106	2.08e-27
RNA N1-methyladenosine dioxygenase activity	Hs	molecular function	256	6.33e-85

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
DNA repair	PANTHER	biological process	1.6E-77
DNA dealkylation involved in DNA repair	PANTHER	biological process	1.6E-77
oxidoreductase activity	ProSiteProfiles	molecular function	13.511
oxidative single-stranded DNA demethylation	PANTHER	biological process	1.6E-77
dioxygenase activity	PANTHER	molecular function	1.6E-77
oxidation-reduction process	ProSiteProfiles	biological process	13.511

Gene Card

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