Aniseed - Gene card

Gene Card

Best human hits

MYBPC1; MYBPC2; MYBPC3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000146

Gene Model ID

KH2012:KH.C1.113

Location

KhC1:2060452..2084212

Transcript Models and Sequences

KH2012:KH.C1.113.v1.A.SL1-1
KH2012:KH.C1.113.v1.A.SL2-1
KH2012:KH.C1.113.v2.A.SL1-1
KH2012:KH.C1.113.v2.A.SL2-1
KH2012:KH.C1.113.v3.A.SL1-1
KH2012:KH.C1.113.v3.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004377
NCBI Reference Sequence	XM_018815382.1

Collections

Gene collection 1 (N. Satoh)

1 result

cilv041p09

Plate: R1CiGC28o16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
FN3_dom	CDD	Fibronectin type III
Ig-like_dom_sf	SUPERFAMILY	Immunoglobulin-like domain superfamily
Ig-like_dom	ProSiteProfiles	Immunoglobulin-like domain
Ig-like_fold	Gene3D	Immunoglobulin-like fold
Ig_sub2	SMART	Immunoglobulin subtype 2
FN3_dom	ProSiteProfiles	Fibronectin type III
Ig_sub	SMART	Immunoglobulin subtype
FN3_dom	SMART	Fibronectin type III
Ig_I-set	Pfam	Immunoglobulin I-set
FN3_sf	SUPERFAMILY	Fibronectin type III superfamily
FN3_dom	Pfam	Fibronectin type III

GOSlim

22 results

GO Term	Annotation Origin	Type
actin binding	Orthology	molecular function
protein binding	Orthology	molecular function
cytosol	Orthology	cellular component
cell adhesion	Orthology	biological process
identical protein binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
actin filament binding	Orthology	molecular function
nucleoside-triphosphatase regulator activity	Orthology	molecular function
positive regulation of hydrolase activity	Orthology	biological process
enzyme activator activity	Orthology	molecular function
anatomical structure morphogenesis	Orthology	biological process
heart development	Orthology	biological process
cytoplasmic part	Orthology	cellular component
cytoskeletal part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
organelle organization	Orthology	biological process
structural molecule activity	Orthology	molecular function
organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
cytoskeletal protein binding	Orthology	molecular function
nucleoside-triphosphatase activity	Orthology	molecular function
cell development	Orthology	biological process

GO (Orthology)

34 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ATPase activator activity	Hs	molecular function
heart morphogenesis	Hs	biological process
actin binding	Hs	molecular function
protein binding	Hs	molecular function
cytosol	Hs	cellular component
muscle myosin complex	Hs	cellular component
striated muscle myosin thick filament	Hs	cellular component
muscle contraction	Hs	biological process
striated muscle contraction	Hs	biological process
regulation of striated muscle contraction	Hs	biological process
actin filament organization	Hs	biological process
cell adhesion	Hs	biological process
structural constituent of muscle	Hs	molecular function
C zone	Hs	cellular component
myosin binding	Hs	molecular function
myofibril	Hs	cellular component
sarcomere	Hs	cellular component
Z disc	Hs	cellular component
M band	Hs	cellular component
titin binding	Hs	molecular function
A band	Hs	cellular component
myosin heavy chain binding	Hs	molecular function
positive regulation of ATPase activity	Hs	biological process
myosin filament	Hs	cellular component
identical protein binding	Hs	molecular function
sarcomere organization	Hs	biological process
metal ion binding	Hs	molecular function
actin filament binding	Hs	molecular function
muscle alpha-actinin binding	Hs	molecular function
ventricular cardiac muscle tissue morphogenesis	Hs	biological process
cardiac muscle contraction	Hs	biological process
striated muscle myosin thick filament assembly	Hs	biological process
structural molecule activity conferring elasticity	Hs	molecular function
cardiac myofibril	Hs	cellular component

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
ATPase activator activity	Hs	molecular function	708
actin binding	Hs	molecular function	708
protein binding	Hs	molecular function	708
cytosol	Hs	cellular component	708
muscle myosin complex	Hs	cellular component	684
striated muscle myosin thick filament	Hs	cellular component	708
structural constituent of muscle	Hs	molecular function	708
C zone	Hs	cellular component	708
myosin binding	Hs	molecular function	708
myofibril	Hs	cellular component	677
sarcomere	Hs	cellular component	708
Z disc	Hs	cellular component	708
M band	Hs	cellular component	708
titin binding	Hs	molecular function	708
A band	Hs	cellular component	708
myosin heavy chain binding	Hs	molecular function	708
myosin filament	Hs	cellular component	708
identical protein binding	Hs	molecular function	708
metal ion binding	Hs	molecular function	708
actin filament binding	Hs	molecular function	708
muscle alpha-actinin binding	Hs	molecular function	708
structural molecule activity conferring elasticity	Hs	molecular function	708
cardiac myofibril	Hs	cellular component	708

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	1.43E-32