Aniseed - Gene card

Gene 'KH2012:KH.C1.1080'

Gene Card

Best human hits

FCGBP; SSPO; VWF

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000092

Gene Model ID

KH2012:KH.C1.1080

Location

KhC1:3133693..3139780

Transcript Models and Sequences

KH2012:KH.C1.1080.v1.A.SL1-1
KH2012:KH.C1.1080.v1.A.SL2-1
KH2012:KH.C1.1080.v1.A.SL3-1
KH2012:KH.C1.1080.v1.A.SL4-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005252
NCBI Reference Sequence	XM_002130532.3

Collections

Gene collection 1 (N. Satoh)

1 result

ciad098j19

Plate: R1CiGC37a08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
Ser_inhib-like_sf	SUPERFAMILY	Serine protease inhibitor-like superfamily
TIL_dom	Pfam	Trypsin Inhibitor-like, cysteine rich domain

GOSlim

17 results

GO Term	Annotation Origin	Type
integrin binding	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
identical protein binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
protein N-terminus binding	Blast	molecular function
extracellular exosome	Blast	cellular component
enzyme binding	Blast	molecular function
macromolecular complex binding	Blast	molecular function
peptidase activity	Blast	molecular function
enzyme regulator activity	Blast	molecular function
extracellular region part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle part	Blast	cellular component
intracellular organelle lumen	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protease binding	Hs	molecular function	42.7	2.07e-04
integrin binding	Hs	molecular function	42.7	2.07e-04
protein binding	Hs	molecular function	42.7	2.07e-04
collagen binding	Hs	molecular function	42.7	2.07e-04
extracellular region	Hs	cellular component	42.7	2.07e-04
proteinaceous extracellular matrix	Hs	cellular component	42.7	2.07e-04
endoplasmic reticulum	Hs	cellular component	42.7	2.07e-04
immunoglobulin binding	Hs	molecular function	42.7	2.07e-04
peptidase inhibitor activity	Hs	molecular function	38.1	0.007
extracellular matrix	Hs	cellular component	42.7	2.07e-04
platelet alpha granule	Hs	cellular component	42.7	2.07e-04
platelet alpha granule lumen	Hs	cellular component	42.7	2.07e-04
Weibel-Palade body	Hs	cellular component	42.7	2.07e-04
identical protein binding	Hs	molecular function	42.7	2.07e-04
protein homodimerization activity	Hs	molecular function	42.7	2.07e-04
protein N-terminus binding	Hs	molecular function	42.7	2.07e-04
chaperone binding	Hs	molecular function	42.7	2.07e-04
extracellular exosome	Hs	cellular component	42.7	2.07e-04

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value