Login
Help

GENE CARD

Submit your Data

  1. Gene 'KH2012:KH.C1.1075'

Gene Card

Best human hits

EME1; EME2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000086

Gene Model ID

KH2012:KH.C1.1075

Location

KhC1:1896274..1899939

Transcript Models and Sequences

  KH2012:KH.C1.1075.v1.A.SL1-1
KH2012:KH.C1.1075.v1.A.SL2-1
KH2012:KH.C1.1075.v1.A.SL3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000001281
NCBI Reference Sequence XM_002128657.4
Collections

Gateway full ORF

2 results

cien160164

Plate: VES95_E02

cien201376

Plate: VES101_C15

Gene collection 1 (N. Satoh)

1 result

cieg042f04

Plate: R1CiGC22e10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Mms4/EME1/EME2 PANTHER Mms4/EME1/EME2
ERCC4_domain Pfam ERCC4 domain

GOSlim

16 results

GO Term Annotation Origin Type
DNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Orthology cellular component
DNA repair Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
hydrolase activity Orthology molecular function
metal ion binding Orthology molecular function
reproductive process Orthology biological process
DNA metabolic process Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
DNA replication Orthology biological process
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
resolution of meiotic recombination intermediates Hs biological process
nuclear chromatin Hs cellular component
DNA binding Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
endodeoxyribonuclease activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nuclear heterochromatin Hs cellular component
nucleolus Hs cellular component
DNA repair Hs biological process
double-strand break repair Hs biological process
DNA recombination Hs biological process
cellular response to DNA damage stimulus Hs biological process
crossover junction endodeoxyribonuclease activity Hs molecular function
hydrolase activity Hs molecular function
replication fork processing Hs biological process
intra-S DNA damage checkpoint Hs biological process
interstrand cross-link repair Hs biological process
metal ion binding Hs molecular function
Holliday junction resolvase complex Hs cellular component
nucleic acid phosphodiester bond hydrolysis Hs biological process

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 114 2.06e-27
DNA binding Hs molecular function 114 2.06e-27
nuclease activity Hs molecular function 114 2.06e-27
endonuclease activity Hs molecular function 114 2.06e-27
endodeoxyribonuclease activity Hs molecular function 114 2.06e-27
protein binding Hs molecular function 114 2.06e-27
nucleus Hs cellular component 114 2.06e-27
nucleoplasm Hs cellular component 114 2.06e-27
nuclear heterochromatin Hs cellular component 114 2.06e-27
nucleolus Hs cellular component 114 2.06e-27
crossover junction endodeoxyribonuclease activity Hs molecular function 114 2.06e-27
hydrolase activity Hs molecular function 114 2.06e-27
metal ion binding Hs molecular function 114 2.06e-27
Holliday junction resolvase complex Hs cellular component 114 2.06e-27

GO (InterProScan)

5 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 1.1E-8
nuclease activity Pfam molecular function 1.1E-8
nucleus PANTHER cellular component 2.6E-88
DNA repair PANTHER biological process 2.6E-88
Holliday junction resolvase complex PANTHER cellular component 2.6E-88

Back to Top