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GENE CARD

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  1. Gene 'KH2012:KH.C1.107'

Gene Card

Best human hits

BHMT; BHMT2; MTR

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000080

Gene Model ID

KH2012:KH.C1.107

Location

KhC1:7789073..7794170

Transcript Models and Sequences

  KH2012:KH.C1.107.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000007560
NCBI Reference Sequence XM_002131938.3
Collections

Gateway full ORF

2 results

cima859456

Plate: VES64_B12

cima860417

Plate: VES64_B15

Gene collection 1 (N. Satoh)

1 result

citb6e5

Plate: R1CiGC29f23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
HCY_dom_sf SUPERFAMILY Homocysteine-binding domain superfamily
HCY_dom_sf Gene3D Homocysteine-binding domain superfamily
HCY_dom ProSiteProfiles Homocysteine-binding domain
HCY_dom Pfam Homocysteine-binding domain
Betaine-hCys_S-MeTrfase_BHMT PIRSF Betaine-homocysteine S-methyltransferase, BHMT

GOSlim

12 results

GO Term Annotation Origin Type
protein binding Blast molecular function
cytoplasm Blast cellular component
cytosol Blast cellular component
zinc ion binding Blast molecular function
transferase activity Blast molecular function
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
metabolic process Blast biological process
cellular biosynthetic process Blast biological process
small molecule binding Blast molecular function
tetrapyrrole binding Blast molecular function
cofactor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 43.9 1.31e-04
cytoplasm Hs cellular component 345 4.85e-117
cytosol Hs cellular component 345 4.85e-117
methyltransferase activity Hs molecular function 345 4.85e-117
zinc ion binding Hs molecular function 345 4.85e-117
methionine synthase activity Hs molecular function 43.9 1.31e-04
transferase activity Hs molecular function 345 4.85e-117
cobalamin binding Hs molecular function 43.9 1.31e-04
metal ion binding Hs molecular function 345 4.85e-117
betaine-homocysteine S-methyltransferase activity Hs molecular function 345 4.85e-117
S-methylmethionine-homocysteine S-methyltransferase activity Hs molecular function 335 1.77e-113
extracellular exosome Hs cellular component 345 4.85e-117

GO (InterProScan)

4 results

GO Term Analysis Type e-value
cytoplasm PIRSF cellular component 2.8E-107
zinc ion binding PIRSF molecular function 2.8E-107
methionine biosynthetic process PIRSF biological process 2.8E-107
betaine-homocysteine S-methyltransferase activity PIRSF molecular function 2.8E-107

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