Aniseed - Gene card

External Database Gene Card

External database links

10 results

Database	Gene ID
ENSEMBL	ENSCING00000009114
ENSEMBL	ENSCING00000020301
NCBI Reference Sequence	XM_009863876.2
NCBI Reference Sequence	XM_018815975.1
NCBI Reference Sequence	XM_018815976.1
NCBI Reference Sequence	XM_018815979.1
NCBI Reference Sequence	XM_018815982.1
NCBI Reference Sequence	XM_018815986.1
NCBI Reference Sequence	XM_018815990.1
NCBI Reference Sequence	XM_018815992.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb034d19

Plate: R1CiGC32e07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Ext_Synaptotagmin_C2B	CDD	Extended synaptotagmin, C2B domain
C2_dom	ProSiteProfiles	C2 domain
SMP_LBD	Pfam	Synaptotagmin-like mitochondrial-lipid-binding domain
C2_dom	SMART	C2 domain
C2_domain_sf	Gene3D	C2 domain superfamily
Ext_Synaptotagmin_C2A	CDD	Extended synaptotagmin, C2A domain
C2C_KIAA1228	CDD	Extended synaptotagmin, C-terminal C2 domain
C2_dom	Pfam	C2 domain

GOSlim

23 results

GO Term	Annotation Origin	Type
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
plasma membrane	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
identical protein binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
anion binding	Orthology	molecular function
cellular metabolic process	Orthology	biological process
organic substance transport	Orthology	biological process
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
binding	Orthology	molecular function
cation binding	Orthology	molecular function
intrinsic component of membrane	Orthology	cellular component
intracellular part	Orthology	cellular component
plasma membrane part	Orthology	cellular component
organelle part	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
cellular process	Orthology	biological process

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
calcium-dependent phospholipid binding	Hs	molecular function
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
plasma membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
glycosphingolipid metabolic process	Hs	biological process
lipid transport	Hs	biological process
endocytosis	Hs	biological process
lipid binding	Hs	molecular function
phosphatidylethanolamine binding	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
integral component of endoplasmic reticulum membrane	Hs	cellular component
phosphatidylcholine binding	Hs	molecular function
intrinsic component of endoplasmic reticulum membrane	Hs	cellular component
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component
phosphatidylinositol binding	Hs	molecular function
identical protein binding	Hs	molecular function
organelle membrane contact site	Hs	cellular component
cadherin binding	Hs	molecular function
metal ion binding	Hs	molecular function
endoplasmic reticulum-plasma membrane tethering	Hs	biological process

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
calcium ion binding	Hs	molecular function	474	1.01e-153
protein binding	Hs	molecular function	474	1.01e-153
calcium-dependent phospholipid binding	Hs	molecular function	474	1.01e-153
endoplasmic reticulum	Hs	cellular component	474	1.01e-153
endoplasmic reticulum membrane	Hs	cellular component	474	1.01e-153
plasma membrane	Hs	cellular component	474	1.01e-153
integral component of plasma membrane	Hs	cellular component	474	1.01e-153
lipid binding	Hs	molecular function	474	1.01e-153
phosphatidylethanolamine binding	Hs	molecular function	474	1.01e-153
membrane	Hs	cellular component	474	1.01e-153
integral component of membrane	Hs	cellular component	474	1.01e-153
integral component of endoplasmic reticulum membrane	Hs	cellular component	340	1.50e-101
phosphatidylcholine binding	Hs	molecular function	474	1.01e-153
intrinsic component of endoplasmic reticulum membrane	Hs	cellular component	474	1.01e-153
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component	474	1.01e-153
phosphatidylinositol binding	Hs	molecular function	474	1.01e-153
identical protein binding	Hs	molecular function	474	1.01e-153
organelle membrane contact site	Hs	cellular component	474	1.01e-153
cadherin binding	Hs	molecular function	474	1.01e-153
metal ion binding	Hs	molecular function	474	1.01e-153

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
lipid transport	CDD	biological process	4.61608E-57
lipid binding	Pfam	molecular function	4.3E-38
endoplasmic reticulum-plasma membrane tethering	CDD	biological process	4.61608E-57

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences