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  1. Gene 'KH2012:KH.C1.1056'

Gene Card

Best human hits

GRB10; GRB14; GRB7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000065

Gene Model ID

KH2012:KH.C1.1056

Location

KhC1:4551891..4562542

Transcript Models and Sequences

  KH2012:KH.C1.1056.v1.A.ND1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000003341
ENSEMBL ENSCING00000010226
NCBI Reference Sequence XM_002125103.4
Collections

Gateway full ORF

2 results

cien56569

Plate: VES79_G04

cien197682

Plate: VES100_K22

Gene collection 1 (N. Satoh)

2 results

cicl020k07

Plate: R1CiGC11g09

cieg040f10

Plate: R1CiGC21n24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
PH_domain Pfam Pleckstrin homology domain
Grb7 PANTHER Growth factor receptor-bound protein 7
BPS-dom Pfam BPS (Between PH and SH2) domain
SH2 ProSiteProfiles SH2 domain
SH2 Pfam SH2 domain
SH2 PRINTS SH2 domain
SH2_dom_sf Gene3D SH2 domain superfamily
SH2 SMART SH2 domain
PH_domain ProSiteProfiles Pleckstrin homology domain
SH2_dom_sf SUPERFAMILY SH2 domain superfamily
PH-like_dom_sf Gene3D PH-like domain superfamily
PH_domain SMART Pleckstrin homology domain

GOSlim

35 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
endosome Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
focal adhesion Orthology cellular component
signal transduction Orthology biological process
axon guidance Orthology biological process
positive regulation of signal transduction Orthology biological process
membrane Orthology cellular component
protein kinase binding Orthology molecular function
cell junction Orthology cellular component
negative regulation of Wnt signaling pathway Orthology biological process
macromolecular complex Orthology cellular component
identical protein binding Orthology molecular function
protein homodimerization activity Orthology molecular function
cell projection Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
receptor binding Orthology molecular function
macromolecular complex binding Orthology molecular function
cell surface receptor signaling pathway Orthology biological process
binding Orthology molecular function
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
negative regulation of gene expression Orthology biological process
cell migration Orthology biological process
anion binding Orthology molecular function
phosphorylation Orthology biological process
negative regulation of signal transduction Orthology biological process
cellular response to organic substance Orthology biological process
immune system process Orthology biological process

GO (Orthology)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA binding Hs molecular function
SH3/SH2 adaptor activity Hs molecular function
insulin receptor binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
signal transduction Hs biological process
epidermal growth factor receptor signaling pathway Hs biological process
axon guidance Hs biological process
lipid binding Hs molecular function
positive regulation of signal transduction Hs biological process
endosome membrane Hs cellular component
cytoplasmic stress granule Hs cellular component
membrane Hs cellular component
negative regulation of translation Hs biological process
protein kinase binding Hs molecular function
cell junction Hs cellular component
negative regulation of Wnt signaling pathway Hs biological process
positive regulation of cell migration Hs biological process
receptor tyrosine kinase binding Hs molecular function
macromolecular complex Hs cellular component
stress granule assembly Hs biological process
phosphatidylinositol binding Hs molecular function
negative regulation of phosphorylation Hs biological process
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
cell projection Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
negative regulation of insulin receptor signaling pathway Hs biological process
insulin-like growth factor receptor signaling pathway Hs biological process
leukocyte migration Hs biological process

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA binding Hs molecular function 256 1.47e-79
SH3/SH2 adaptor activity Hs molecular function 276 8.81e-87
insulin receptor binding Hs molecular function 276 8.81e-87
protein binding Hs molecular function 276 8.81e-87
cytoplasm Hs cellular component 276 8.81e-87
endosome Hs cellular component 267 6.15e-84
cytosol Hs cellular component 276 8.81e-87
plasma membrane Hs cellular component 276 8.81e-87
focal adhesion Hs cellular component 256 1.47e-79
lipid binding Hs molecular function 256 1.47e-79
endosome membrane Hs cellular component 267 6.15e-84
cytoplasmic stress granule Hs cellular component 256 1.47e-79
membrane Hs cellular component 267 6.15e-84
protein kinase binding Hs molecular function 256 1.47e-79
cell junction Hs cellular component 256 1.47e-79
receptor tyrosine kinase binding Hs molecular function 267 6.15e-84
macromolecular complex Hs cellular component 276 8.81e-87
phosphatidylinositol binding Hs molecular function 256 1.47e-79
identical protein binding Hs molecular function 267 6.15e-84
protein homodimerization activity Hs molecular function 267 6.15e-84
cell projection Hs cellular component 256 1.47e-79
intracellular membrane-bounded organelle Hs cellular component 267 6.15e-84

GO (InterProScan)

2 results

GO Term Analysis Type e-value
SH3/SH2 adaptor activity PANTHER molecular function 6.8E-96
signal transduction PANTHER biological process 6.8E-96

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