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GENE CARD

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  1. Gene 'KH2012:KH.C1.1041'

Gene Card

Best human hits

NIF3L1

Unique Gene ID

Cirobu.g00000049

Gene Model ID

KH2012:KH.C1.1041

Location

KhC1:2815709..2817172

Transcript Models and Sequences

  KH2012:KH.C1.1041.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

4 results

cien103040

Plate: VES86_G11

cima81384

Plate: VES56_L08

cima878680

Plate: VES68_A10

cien170391

Plate: VES96_N15

Gene collection 1 (N. Satoh)

1 result

cicl054f24

Plate: R1CiGC14m06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
NIF3L1_animal PIRSF NIF3-like protein 1, animal
GTP_cyclohydrolase_I/Nif3 Pfam GTP cyclohydrolase 1 type 2/Nif3
GTP_cyclohydrolase_I/Nif3_sf SUPERFAMILY GTP cyclohydrolase 1 type 2/Nif3 superfamily
GTP_cyclohydrolase_I/Nif3 TIGRFAM GTP cyclohydrolase 1 type 2/Nif3
GTP_cyclohydrolase_I/Nif3 PANTHER GTP cyclohydrolase 1 type 2/Nif3

GOSlim

9 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
transcription factor binding Orthology molecular function
neuron differentiation Orthology biological process
identical protein binding Orthology molecular function
positive regulation of transcription, DNA-templated Orthology biological process
negative regulation of nucleic acid-templated transcription Orthology biological process

GO (Orthology)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
transcription factor binding Hs molecular function
neuron differentiation Hs biological process
identical protein binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
negative regulation of nucleic acid-templated transcription Hs biological process

GO (Blast)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 316 4.98e-106
nucleus Hs cellular component 316 4.98e-106
cytoplasm Hs cellular component 316 4.98e-106
mitochondrion Hs cellular component 316 4.98e-106
transcription factor binding Hs molecular function 316 4.98e-106
identical protein binding Hs molecular function 316 4.98e-106

GO (InterProScan)

No result

GO Term Analysis Type e-value