Aniseed - Gene card

Gene 'KH2012:KH.C1.1026'

Gene Card

Best human hits

ASB3; CTTNBP2; GPR75-ASB3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000032

Gene Model ID

KH2012:KH.C1.1026

Location

KhC1:6676077..6678303

Transcript Models and Sequences

KH2012:KH.C1.1026.v1.A.ND1-1
KH2012:KH.C1.1026.v1.A.SL2-1
KH2012:KH.C1.1026.v1.A.SL3-1

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_018813909.1

Collections

Gateway full ORF

5 results

Gene collection 1 (N. Satoh)

3 results

cits031i08

Plate: R1CiGC33p24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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No Phylogeny Tree for this Gene.

Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Ankyrin_rpt-contain_dom	ProSiteProfiles	Ankyrin repeat-containing domain
SOCS_box	Pfam	SOCS box domain
Ankyrin_rpt-contain_sf	SUPERFAMILY	Ankyrin repeat-containing domain superfamily
SOCS_box	ProSiteProfiles	SOCS box domain
Ankyrin_rpt	SMART	Ankyrin repeat
Ankyrin_rpt-contain_sf	Gene3D	Ankyrin repeat-containing domain superfamily
Ankyrin_rpt-contain_dom	CDD	Ankyrin repeat-containing domain

GOSlim

16 results

GO Term	Annotation Origin	Type
ubiquitin-protein transferase activity	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
ubiquitin protein ligase binding	Blast	molecular function
cell projection	Blast	cellular component
intracellular part	Blast	cellular component
macromolecular complex	Blast	cellular component
cell periphery	Blast	cellular component
cytoplasmic part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
synapse part	Blast	cellular component
endomembrane system	Blast	cellular component
neuron part	Blast	cellular component
postsynapse	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	50.4	1.24e-06
ubiquitin-protein transferase activity	Hs	molecular function	50.4	1.24e-06
protein binding	Hs	molecular function	50.4	1.24e-06
nucleus	Hs	cellular component	50.4	1.24e-06
cytoplasm	Hs	cellular component	50.4	1.24e-06
cytosol	Hs	cellular component	49.7	1.74e-06
cell cortex	Hs	cellular component	48.1	8.65e-06
synaptic vesicle	Hs	cellular component	48.1	8.65e-06
SH3 domain binding	Hs	molecular function	48.1	8.65e-06
ubiquitin protein ligase binding	Hs	molecular function	50.4	1.24e-06
cell projection	Hs	cellular component	48.1	8.65e-06
dendritic spine	Hs	cellular component	48.1	8.65e-06

GO (InterProScan)