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GENE CARD

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  1. Gene 'KH2012:KH.C1.1012'

Gene Card

Best human hits

AL136295.1; CHMP4B; CHMP5

Unique Gene ID

Cirobu.g00000017

Gene Model ID

KH2012:KH.C1.1012

Location

KhC1:1647957..1650736

Transcript Models and Sequences

  KH2012:KH.C1.1012.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000004764
Collections

Gateway full ORF

2 results

cima867291

Plate: VES66_F02

cima871314

Plate: VES66_D18

Gene collection 1 (N. Satoh)

2 results

citb1a20

Plate: R1CiGC28b15

cieg031j20

Plate: R1CiGC20n19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
Snf7_fam Pfam Snf7 family

GOSlim

29 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nuclear envelope Blast cellular component
cytoplasm Orthology cellular component
endosome Orthology cellular component
cytosol Orthology cellular component
protein transport Orthology biological process
membrane Orthology cellular component
integral component of membrane Blast cellular component
midbody Blast cellular component
vesicle Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
extracellular exosome Orthology cellular component
cell division Orthology biological process
membrane organization Orthology biological process
organelle organization Orthology biological process
regulation of cellular metabolic process Orthology biological process
regulation of signaling Orthology biological process
intracellular transport Orthology biological process
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
microtubule-based process Orthology biological process
cell adhesion molecule binding Orthology molecular function
membrane part Blast cellular component
macromolecular complex Blast cellular component
plasma membrane part Blast cellular component
cytoplasmic part Blast cellular component

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
cell separation after cytokinesis Hs biological process
regulation of receptor recycling Hs biological process
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
endosome Hs cellular component
cytosol Hs cellular component
nucleus organization Hs biological process
vacuolar transport Hs biological process
lysosome organization Hs biological process
mitotic metaphase plate congression Hs biological process
endosome to lysosome transport Hs biological process
endosome membrane Hs cellular component
regulation of centrosome duplication Hs biological process
protein transport Hs biological process
membrane Hs cellular component
endosomal transport Hs biological process
multivesicular body assembly Hs biological process
cadherin binding Hs molecular function
extracellular exosome Hs cellular component
multivesicular body sorting pathway Hs biological process
regulation of mitotic spindle assembly Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ESCRT III complex Hs cellular component 45.8 4.85e-06
protein binding Hs molecular function 285 9.26e-99
nucleus Hs cellular component 285 9.26e-99
nuclear envelope Hs cellular component 45.8 4.85e-06
cytoplasm Hs cellular component 285 9.26e-99
endosome Hs cellular component 285 9.26e-99
cytosol Hs cellular component 285 9.26e-99
cytoplasmic side of plasma membrane Hs cellular component 45.8 4.85e-06
endosome membrane Hs cellular component 285 9.26e-99
membrane Hs cellular component 285 9.26e-99
integral component of membrane Hs cellular component 48.1 1.41e-06
membrane coat Hs cellular component 45.8 4.85e-06
midbody Hs cellular component 45.8 4.85e-06
late endosome membrane Hs cellular component 45.8 4.85e-06
vesicle Hs cellular component 45.8 4.85e-06
identical protein binding Hs molecular function 45.8 4.85e-06
protein homodimerization activity Hs molecular function 45.8 4.85e-06
cadherin binding Hs molecular function 285 9.26e-99
extracellular exosome Hs cellular component 285 9.26e-99

GO (InterProScan)

1 result

GO Term Analysis Type e-value
vacuolar transport Pfam biological process 1.8E-50