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GENE CARD

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  1. Gene 'KH2012:KH.C1.1009'

Gene Card

Best human hits

CCDC50

Unique Gene ID

Cirobu.g00000013

Gene Model ID

KH2012:KH.C1.1009

Location

KhC1:7950826..7956627

Transcript Models and Sequences

  KH2012:KH.C1.1009.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000007580
Collections

Gateway full ORF

2 results

cien34951

Plate: VES75_O22

cien51888

Plate: VES78_F10

Gene collection 1 (N. Satoh)

1 result

cicl057f06

Plate: R1CiGC14h14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
CCDC50_N Pfam Coiled-coil domain-containing protein 50, N-terminal

GOSlim

5 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
sensory perception of sound Orthology biological process
ubiquitin protein ligase binding Orthology molecular function

GO (Orthology)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
sensory perception of sound Hs biological process
ubiquitin protein ligase binding Hs molecular function

GO (Blast)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 75.9 1.14e-14
cytoplasm Hs cellular component 75.9 1.14e-14
cytosol Hs cellular component 75.9 1.14e-14
ubiquitin protein ligase binding Hs molecular function 75.9 1.14e-14

GO (InterProScan)

No result

GO Term Analysis Type e-value