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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

TUBB; TUBB2B; TUBB4B

Species

B.schlosseri

Unique Gene ID

Boschl.g00061871

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g61871

Location

chrUn:360730785..360732481

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g61871.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
Tubulin_C Gene3D Tubulin, C-terminal
Beta-tubulin_BS ProSitePatterns Beta tubulin, autoregulation binding site
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily
Tubulin_CS ProSitePatterns Tubulin, conserved site
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_2-layer-sand-dom SMART Tubulin/FtsZ, 2-layer sandwich domain
Tubulin/FtsZ_2-layer-sand-dom Pfam Tubulin/FtsZ, 2-layer sandwich domain
Beta_tubulin PANTHER Beta tubulin
Beta_tubulin PRINTS Beta tubulin
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin PRINTS Tubulin
Tubulin PANTHER Tubulin

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 848 0.0
double-stranded RNA binding Hs molecular function 848 0.0
GTPase activity Hs molecular function 848 0.0
structural molecule activity Hs molecular function 845 0.0
structural constituent of cytoskeleton Hs molecular function 848 0.0
protein binding Hs molecular function 847 0.0
GTP binding Hs molecular function 848 0.0
extracellular region Hs cellular component 848 0.0
nucleus Hs cellular component 848 0.0
nuclear envelope lumen Hs cellular component 845 0.0
cytoplasm Hs cellular component 848 0.0
cytosol Hs cellular component 848 0.0
cytoskeleton Hs cellular component 848 0.0
microtubule Hs cellular component 848 0.0
microtubule cytoskeleton Hs cellular component 847 0.0
ubiquitin protein ligase binding Hs molecular function 845 0.0
azurophil granule lumen Hs cellular component 848 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 845 0.0
MHC class I protein binding Hs molecular function 848 0.0
myelin sheath Hs cellular component 848 0.0
cell body Hs cellular component 845 0.0
protein heterodimerization activity Hs molecular function 847 0.0
unfolded protein binding Hs molecular function 848 0.0
extracellular exosome Hs cellular component 848 0.0
extracellular vesicle Hs cellular component 848 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 2.0E-69
structural constituent of cytoskeleton PANTHER molecular function 0.0
GTP binding PANTHER molecular function 0.0
microtubule PANTHER cellular component 0.0
microtubule-based process PANTHER biological process 0.0