Aniseed - Gene card

Gene Card

Best human hits

MTF2; PHF1; PHF19

Species

B.schlosseri

Unique Gene ID

Boschl.g00061448

Gene Model ID

Boschl.CG.Botznik2013.chr10.g61448

Location

chr10:5658522..5665261

Transcript Models and Sequences

Boschl.CG.Botznik2013.chr10.g61448.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Znf_FYVE_PHD	SUPERFAMILY	Zinc finger, FYVE/PHD-type

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
centrosome	Hs	cellular component
microtubule organizing center	Hs	cellular component
cytoskeleton	Hs	cellular component
focal adhesion	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
segment specification	Hs	biological process
stem cell population maintenance	Hs	biological process
regulation of histone methylation	Hs	biological process
methylated histone binding	Hs	molecular function
ESC/E(Z) complex	Hs	cellular component
site of double-strand break	Hs	cellular component
negative regulation of gene expression, epigenetic	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
stem cell differentiation	Hs	biological process
negative regulation of histone H3-K27 methylation	Hs	biological process
chromatin binding	Hs	molecular function

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	117	1.94e-28
DNA binding	Hs	molecular function	117	1.94e-28
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	108	1.90e-25
protein binding	Hs	molecular function	132	2.10e-33
nucleus	Hs	cellular component	132	2.10e-33
nucleoplasm	Hs	cellular component	132	2.10e-33
cytoplasm	Hs	cellular component	117	1.94e-28
centrosome	Hs	cellular component	108	1.90e-25
microtubule organizing center	Hs	cellular component	108	1.90e-25
cytoskeleton	Hs	cellular component	108	1.90e-25
focal adhesion	Hs	cellular component	117	1.94e-28
methylated histone binding	Hs	molecular function	132	2.10e-33
ESC/E(Z) complex	Hs	cellular component	132	2.10e-33
site of double-strand break	Hs	cellular component	108	1.90e-25
metal ion binding	Hs	molecular function	132	2.10e-33

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value