Aniseed - Gene card

Gene Card

Best human hits

CIR1

Species

B.schlosseri

Unique Gene ID

Boschl.g00060344

Gene Model ID

Boschl.CG.Botznik2013.chr12.g60344

Location

chr12:3899185..3900274

Transcript Models and Sequences

Boschl.CG.Botznik2013.chr12.g60344.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
CIR_N_dom	SMART	CBF1-interacting co-repressor CIR, N-terminal domain
CIR_N_dom	Pfam	CBF1-interacting co-repressor CIR, N-terminal domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
histone deacetylase complex	Hs	cellular component
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function
transcription corepressor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
centrosome	Hs	cellular component
microtubule organizing center	Hs	cellular component
cytoskeleton	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
mRNA processing	Hs	biological process
RNA splicing	Hs	biological process
nuclear speck	Hs	cellular component
protein kinase binding	Hs	molecular function
macromolecular complex	Hs	cellular component
negative regulation of transcription, DNA-templated	Hs	biological process

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone deacetylase complex	Hs	cellular component	233	7.69e-73
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	233	7.69e-73
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	233	7.69e-73
transcription corepressor activity	Hs	molecular function	233	7.69e-73
protein binding	Hs	molecular function	233	7.69e-73
nucleus	Hs	cellular component	233	7.69e-73
cytoplasm	Hs	cellular component	233	7.69e-73
centrosome	Hs	cellular component	233	7.69e-73
microtubule organizing center	Hs	cellular component	233	7.69e-73
cytoskeleton	Hs	cellular component	233	7.69e-73
nuclear speck	Hs	cellular component	233	7.69e-73
protein kinase binding	Hs	molecular function	233	7.69e-73
macromolecular complex	Hs	cellular component	233	7.69e-73

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value