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GENE CARD

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Gene Card

Best human hits

SNW1

Species

B.schlosseri

Unique Gene ID

Boschl.g00016129

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g16129

Location

chrUn:104577861..104584606

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g16129.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
SKI-int_prot_SKIP PANTHER SKI-interacting protein, SKIP
SKI-int_prot_SKIP_SNW-dom Pfam SKI-interacting protein SKIP, SNW domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromatin Hs cellular component 612 0.0
transcription coactivator activity Hs molecular function 612 0.0
transcription corepressor activity Hs molecular function 612 0.0
RNA binding Hs molecular function 612 0.0
Notch binding Hs molecular function 612 0.0
protein binding Hs molecular function 612 0.0
nucleus Hs cellular component 612 0.0
nucleoplasm Hs cellular component 612 0.0
spliceosomal complex Hs cellular component 612 0.0
cytoplasm Hs cellular component 612 0.0
cyclin/CDK positive transcription elongation factor complex Hs cellular component 612 0.0
nuclear matrix Hs cellular component 612 0.0
nuclear body Hs cellular component 612 0.0
nuclear speck Hs cellular component 612 0.0
enzyme binding Hs molecular function 612 0.0
nuclear hormone receptor binding Hs molecular function 612 0.0
vitamin D receptor binding Hs molecular function 612 0.0
retinoic acid receptor binding Hs molecular function 612 0.0
SMAD binding Hs molecular function 612 0.0
androgen receptor binding Hs molecular function 612 0.0
U2-type catalytic step 2 spliceosome Hs cellular component 612 0.0
catalytic step 2 spliceosome Hs cellular component 612 0.0
post-mRNA release spliceosomal complex Hs cellular component 612 0.0
SMAD protein complex Hs cellular component 612 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
mRNA splicing, via spliceosome PANTHER biological process 2.7E-232
spliceosomal complex PANTHER cellular component 2.7E-232