Aniseed - Gene card

Transcript 'Boleac.CG.SB_v3.S2.g...' >
Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

RPL23

Species

B.schlosseri

Unique Gene ID

Boschl.g00002230

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g02230

Location

chrUn:14662348..14665107

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g02230.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Ribosomal_L14P_CS	ProSitePatterns	Ribosomal protein L14P, conserved site
Ribosomal_L14_sf	Gene3D	Ribosomal protein L14 superfamily
Ribosomal_L14_sf	SUPERFAMILY	Ribosomal protein L14 superfamily
Ribosomal_L14P	Pfam	Ribosomal protein L14P
Ribosomal_L14P	SMART	Ribosomal protein L14P
Ribosomal_L14P	Hamap	Ribosomal protein L14P
Ribosomal_L14P	PANTHER	Ribosomal protein L14P

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

33 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Hs	biological process
transcription coactivator binding	Hs	molecular function
RNA binding	Hs	molecular function
structural constituent of ribosome	Hs	molecular function
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
ribosome	Hs	cellular component
focal adhesion	Hs	cellular component
rRNA processing	Hs	biological process
translation	Hs	biological process
translational initiation	Hs	biological process
ribosomal protein import into nucleus	Hs	biological process
SRP-dependent cotranslational protein targeting to membrane	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
positive regulation of gene expression	Hs	biological process
membrane	Hs	cellular component
cytosolic large ribosomal subunit	Hs	cellular component
intracellular ribonucleoprotein complex	Hs	cellular component
ubiquitin protein ligase binding	Hs	molecular function
macromolecular complex	Hs	cellular component
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein stabilization	Hs	biological process
extracellular exosome	Hs	cellular component
large ribosomal subunit rRNA binding	Hs	molecular function
negative regulation of cell cycle arrest	Hs	biological process
positive regulation of cell cycle arrest	Hs	biological process
negative regulation of ubiquitin protein ligase activity	Hs	biological process
ubiquitin ligase inhibitor activity	Hs	molecular function
negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcription coactivator binding	Hs	molecular function	259	9.61e-91
RNA binding	Hs	molecular function	259	9.61e-91
structural constituent of ribosome	Hs	molecular function	259	9.61e-91
protein binding	Hs	molecular function	259	9.61e-91
nucleoplasm	Hs	cellular component	259	9.61e-91
nucleolus	Hs	cellular component	259	9.61e-91
cytoplasm	Hs	cellular component	259	9.61e-91
cytosol	Hs	cellular component	259	9.61e-91
ribosome	Hs	cellular component	259	9.61e-91
focal adhesion	Hs	cellular component	259	9.61e-91
membrane	Hs	cellular component	259	9.61e-91
cytosolic large ribosomal subunit	Hs	cellular component	259	9.61e-91
intracellular ribonucleoprotein complex	Hs	cellular component	259	9.61e-91
ubiquitin protein ligase binding	Hs	molecular function	259	9.61e-91
macromolecular complex	Hs	cellular component	259	9.61e-91
extracellular exosome	Hs	cellular component	259	9.61e-91
large ribosomal subunit rRNA binding	Hs	molecular function	259	9.61e-91
ubiquitin ligase inhibitor activity	Hs	molecular function	259	9.61e-91

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
structural constituent of ribosome	PANTHER	molecular function	2.7E-75
ribosome	PANTHER	cellular component	2.7E-75
translation	PANTHER	biological process	2.7E-75