Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

ADAMTS10; ADAMTS18; ADAMTS6

Species

B.schlosseri

Unique Gene ID

Boschl.g00000065

Gene Model ID

Boschl.CG.Botznik2013.chr13.g00065

Location

chr13:10320316..10327049

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr13.g00065.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
ADAM_spacer1 Pfam ADAM-TS Spacer 1
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
Peptidase_M12B_N Pfam Peptidase M12B, propeptide
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
MetalloPept_cat_dom_sf Gene3D Metallopeptidase, catalytic domain superfamily
Peptidase_M12B Pfam Peptidase M12B, ADAM/reprolysin
Peptidase_M12B ProSiteProfiles Peptidase M12B, ADAM/reprolysin

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
microfibril Hs cellular component
metalloendopeptidase activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
proteolysis Hs biological process
heart development Hs biological process
peptidase activity Hs molecular function
metallopeptidase activity Hs molecular function
hydrolase activity Hs molecular function
extracellular matrix Hs cellular component
aorta development Hs biological process
metal ion binding Hs molecular function
coronary vasculature development Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
microfibril Hs cellular component 789 0.0
metalloendopeptidase activity Hs molecular function 997 0.0
protein binding Hs molecular function 789 0.0
extracellular region Hs cellular component 997 0.0
proteinaceous extracellular matrix Hs cellular component 997 0.0
peptidase activity Hs molecular function 997 0.0
metallopeptidase activity Hs molecular function 997 0.0
hydrolase activity Hs molecular function 997 0.0
extracellular matrix Hs cellular component 789 0.0
metal ion binding Hs molecular function 997 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
metalloendopeptidase activity Pfam molecular function 1.2E-21
proteolysis Pfam biological process 1.2E-21
metallopeptidase activity Gene3D molecular function 2.4E-90