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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

COL14A1; COL7A1

Species

B.schlosseri

Unique Gene ID

Boschl.g00000034

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g00034

Location

chrUn:154922..157743

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g00034.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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No Phylogeny Tree for this Gene.
Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
FN3_dom CDD Fibronectin type III
FN3_sf SUPERFAMILY Fibronectin type III superfamily
FN3_dom ProSiteProfiles Fibronectin type III
FN3_dom SMART Fibronectin type III
Ig-like_fold Gene3D Immunoglobulin-like fold

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 38.5 0.008
RNA binding Hs molecular function 39.7 0.003
serine-type endopeptidase inhibitor activity Hs molecular function 38.5 0.008
extracellular matrix structural constituent Hs molecular function 39.7 0.003
protein binding Hs molecular function 39.7 0.003
collagen binding Hs molecular function 39.7 0.003
extracellular region Hs cellular component 39.7 0.003
proteinaceous extracellular matrix Hs cellular component 39.7 0.003
collagen trimer Hs cellular component 39.7 0.003
collagen type VII trimer Hs cellular component 38.5 0.008
collagen type XIV trimer Hs cellular component 39.7 0.003
basement membrane Hs cellular component 38.5 0.008
extracellular space Hs cellular component 39.7 0.003
endoplasmic reticulum lumen Hs cellular component 39.7 0.003
COPII-coated ER to Golgi transport vesicle Hs cellular component 38.5 0.008
peptidase inhibitor activity Hs molecular function 38.5 0.008
protein binding, bridging Hs molecular function 39.7 0.003
extracellular matrix Hs cellular component 39.7 0.003
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 38.5 0.008
identical protein binding Hs molecular function 38.5 0.008
extracellular exosome Hs cellular component 39.7 0.003

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.8E-7