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GENE CARD

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Gene Card

Best human hits

TBX2; TBX5; TBX6

Species

B.leachii

Unique Gene ID

Boleac.g00006110

Gene Model ID

Boleac.CG.SB_v3.S256.g06110

Location

S256:79906..85120

Transcript Models and Sequences

  Boleac.CG.SB_v3.S256.g06110.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
TF_T-box ProSiteProfiles Transcription factor, T-box
T-box_sf Gene3D T-box superfamily
TF_T-box PRINTS Transcription factor, T-box
TF_T-box Pfam Transcription factor, T-box
TF_T-box_CS ProSitePatterns Transcription factor, T-box, conserved site
Sec3-PIP2_bind Pfam Exocyst complex component Sec3, PIP2-binding N-terminal domain
Synaptobrevin ProSiteProfiles Synaptobrevin
TF_T-box PANTHER Transcription factor, T-box
TF_T-box SMART Transcription factor, T-box
p53-like_TF_DNA-bd SUPERFAMILY p53-like transcription factor, DNA-binding
Sec3-PIP2_bind SMART Exocyst complex component Sec3, PIP2-binding N-terminal domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
cytoplasm Hs cellular component
integral component of membrane Hs cellular component
vesicle-mediated transport Hs biological process
exocyst Hs cellular component
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function
plasma membrane Hs cellular component
cell-cell adherens junction Hs cellular component
Golgi to plasma membrane transport Hs biological process
membrane Hs cellular component
GTP-Rho binding Hs molecular function
regulation of SNARE complex assembly Hs biological process
negative regulation of exocytosis Hs biological process
exocyst localization Hs biological process
cell-cell adhesion Hs biological process
cadherin binding involved in cell-cell adhesion Hs molecular function

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 127 4.21e-32
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 143 6.56e-37
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 150 1.44e-40
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 150 1.44e-40
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 143 6.56e-37
RNA polymerase II transcription factor binding Hs molecular function 150 1.44e-40
RNA polymerase II activating transcription factor binding Hs molecular function 150 1.44e-40
transcriptional repressor activity, RNA polymerase II transcription factor binding Hs molecular function 150 1.44e-40
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 127 4.21e-32
DNA binding Hs molecular function 150 1.44e-40
transcription factor activity, sequence-specific DNA binding Hs molecular function 150 1.44e-40
protein binding Hs molecular function 150 1.44e-40
nucleus Hs cellular component 150 1.44e-40
nucleoplasm Hs cellular component 127 4.21e-32
transcription factor complex Hs cellular component 143 6.56e-37
cytoplasm Hs cellular component 127 4.21e-32
transcription factor binding Hs molecular function 127 4.21e-32
macromolecular complex Hs cellular component 127 4.21e-32
protein-DNA complex Hs cellular component 127 4.21e-32
sequence-specific DNA binding Hs molecular function 143 6.56e-37

GO (InterProScan)

5 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 3.3E-60
nucleus PANTHER cellular component 3.3E-60
regulation of transcription, DNA-templated PANTHER biological process 3.3E-60
integral component of membrane ProSiteProfiles cellular component 9.341
vesicle-mediated transport ProSiteProfiles biological process 9.341

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