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Gene Card

Best human hits

SHANK1; SHANK2; SHANK3

Species

B.leachii

Unique Gene ID

Boleac.g00000035

Gene Model ID

Boleac.CG.SB_v3.S0.g00035

Location

S0:319802..340866

Transcript Models and Sequences

  Boleac.CG.SB_v3.S0.g00035.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Ankyrin_rpt ProSiteProfiles Ankyrin repeat
Ankyrin_rpt-contain_dom CDD Ankyrin repeat-containing domain
Ankyrin_rpt-contain_sf SUPERFAMILY Ankyrin repeat-containing domain superfamily
Ankyrin_rpt-contain_sf Gene3D Ankyrin repeat-containing domain superfamily
Ankyrin_rpt SMART Ankyrin repeat
Ankyrin_rpt-contain_dom Pfam Ankyrin repeat-containing domain
Ankyrin_rpt-contain_dom ProSiteProfiles Ankyrin repeat-containing domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

67 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
MAPK cascade Hs biological process
photoreceptor outer segment Hs cellular component
photoreceptor inner segment Hs cellular component
protein binding Hs molecular function
intracellular Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
neurofilament Hs cellular component
plasma membrane Hs cellular component
cytoskeletal anchoring at plasma membrane Hs biological process
nervous system development Hs biological process
synapse assembly Hs biological process
learning or memory Hs biological process
learning Hs biological process
memory Hs biological process
long-term memory Hs biological process
locomotory behavior Hs biological process
protein C-terminus binding Hs molecular function
associative learning Hs biological process
ionotropic glutamate receptor complex Hs cellular component
postsynaptic density Hs cellular component
membrane Hs cellular component
apical plasma membrane Hs cellular component
SH3 domain binding Hs molecular function
NMDA selective glutamate receptor complex Hs cellular component
cell junction Hs cellular component
cell differentiation Hs biological process
receptor signaling complex scaffold activity Hs molecular function
GKAP/Homer scaffold activity Hs molecular function
dendrite Hs cellular component
growth cone Hs cellular component
adult behavior Hs biological process
brush border membrane Hs cellular component
somatostatin receptor binding Hs molecular function
social behavior Hs biological process
ionotropic glutamate receptor binding Hs molecular function
protein localization to synapse Hs biological process
locomotory exploration behavior Hs biological process
locomotion Hs biological process
olfactory behavior Hs biological process
identical protein binding Hs molecular function
cell projection Hs cellular component
neuron projection Hs cellular component
neuronal cell body Hs cellular component
dendritic spine Hs cellular component
neuron spine Hs cellular component
macromolecular complex binding Hs molecular function
synapse Hs cellular component
postsynaptic membrane Hs cellular component
habituation Hs biological process
regulation of synaptic plasticity Hs biological process
brain morphogenesis Hs biological process
neuromuscular process controlling balance Hs biological process
positive regulation of synaptic transmission, glutamatergic Hs biological process
synapse maturation Hs biological process
excitatory synapse Hs cellular component
ciliary membrane Hs cellular component
long-term synaptic potentiation Hs biological process
long term synaptic depression Hs biological process
dendritic spine morphogenesis Hs biological process
positive regulation of dendritic spine development Hs biological process
regulation of dendritic spine morphogenesis Hs biological process
ankyrin repeat binding Hs molecular function
postsynaptic density assembly Hs biological process
scaffold protein binding Hs molecular function
AMPA glutamate receptor clustering Hs biological process
regulation of AMPA receptor activity Hs biological process

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
photoreceptor outer segment Hs cellular component 182 1.97e-50
photoreceptor inner segment Hs cellular component 182 1.97e-50
protein binding Hs molecular function 182 1.97e-50
intracellular Hs cellular component 176 1.84e-48
cytoplasm Hs cellular component 182 1.97e-50
cytosol Hs cellular component 182 1.97e-50
neurofilament Hs cellular component 182 1.97e-50
plasma membrane Hs cellular component 182 1.97e-50
protein C-terminus binding Hs molecular function 176 1.84e-48
ionotropic glutamate receptor complex Hs cellular component 182 1.97e-50
postsynaptic density Hs cellular component 182 1.97e-50
membrane Hs cellular component 182 1.97e-50
apical plasma membrane Hs cellular component 182 1.97e-50
SH3 domain binding Hs molecular function 182 1.97e-50
NMDA selective glutamate receptor complex Hs cellular component 175 4.36e-48
cell junction Hs cellular component 182 1.97e-50
receptor signaling complex scaffold activity Hs molecular function 175 4.36e-48
GKAP/Homer scaffold activity Hs molecular function 182 1.97e-50
dendrite Hs cellular component 175 4.36e-48
growth cone Hs cellular component 182 1.97e-50
brush border membrane Hs cellular component 182 1.97e-50
somatostatin receptor binding Hs molecular function 175 4.36e-48
ionotropic glutamate receptor binding Hs molecular function 182 1.97e-50
identical protein binding Hs molecular function 175 4.36e-48
cell projection Hs cellular component 182 1.97e-50
neuron projection Hs cellular component 182 1.97e-50
neuronal cell body Hs cellular component 182 1.97e-50
dendritic spine Hs cellular component 182 1.97e-50
neuron spine Hs cellular component 176 1.84e-48
macromolecular complex binding Hs molecular function 175 4.36e-48
synapse Hs cellular component 182 1.97e-50
postsynaptic membrane Hs cellular component 182 1.97e-50
excitatory synapse Hs cellular component 175 4.36e-48
ciliary membrane Hs cellular component 182 1.97e-50
ankyrin repeat binding Hs molecular function 175 4.36e-48
scaffold protein binding Hs molecular function 176 1.84e-48

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SMART molecular function 1.4E-4

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