- Construct 'CONS00000265' >
- Construct 'CONS00000624'
Construct
ID
CONS00000624
Name
pCi-RhoD -1299/83::LacZ
Min Promoter
Endogenous Promoter
Reporter
Comment
region from -1299bp to +83 upstream Ci-RhoD/F gene. The FoxF and Ets1/2 regulatory motifs were absent. The complete cis regulatory region drives RhoD expression in notochord, TVC, muscles and mesenchyme. Here, the absence of the regulatory motifs abolish expression in notochord, and TVC.
Be careful, coordinates in the paper are different from ANISEED coordinates. We took the KH transcript model as reference. Coordinates in the paper : -1365/+17
Show sequence
Length: 1,382
TTGACTGACAAGACCACAGTTTCCTGTGAGTTGCGCGAGTCTATATACTGCGGCAAAAGA
CGTTAGAAGGCTGTGACCTGCTGGAAAGCCTTTGCCAGCTAACCTACCGTATCGTATTTA
GCGGCTAGTCTTTCAAGTCAAGTTGTACGAATCGTTTTAGTTGTATTCATACGTCGCGAG
CGGAGTTAATTATAGTGACAGATTTTTGAACTAAATGAACGTAGTTATAAATATTGTGAG
TGAAATTCAAGCAGTAAGTGTATATAGTTAGAAGCATATGAAGTCATGGTGTATACCATT
TCGCAAAGTGTTAAAGAGGACAATTCAATACAGTCAACACGGTGTATAAAGTGCCGAAGT
ATGGGTTTACACTATTTTAATATGGTTTGTGTGAGTTGTTGTACATTTAATTTTTGAAAT
CAAGCTCACTGTACAGTTTGACGACTTGCGAATAGGTCGAACATGATTACATTTTAGCCA
GAATTAGTTATGAGTTTCATGGTTAATTTTACTATTTCCTAAACGCTGTCAATTTACTGT
GTATTATTAGATCTACTAGCAATAAAGTAATGCATTGCACGAGGGTTTAGTAACAAAAGC
ATGTTAATAACCGGGTTATAAATAACTCAGAACGTTTCGAAAATCGACATAGTGACTGGC
CTACTATATCACCGAAGACGTAATAGACTATATATGCATAACACGCACATGCTTTGCGCC
ATGTATATATATGATATTTGAATATAGATTTGATCACGCCGAAAGCTGTCCAGACTAAGA
ATGCTTACAAAGGTAAGTTTCAGACAGTTCTATAAAGTTACACCAGCGTTATACAAAGGA
TCTGTATGGCAACGTCAGACAATTTGCGTAACAGGAAGCAGAACTACTTGTTTCTAACGT
CACAGTCCCCTAGCGGCCTAGTGAATAACGGTGGCGAAAGATAGATAGTAAGTTTTTTTT
ATTGTTTTATGTCCTTGGAGAGGTAAATAAATTAACTAGGAGATGATTGAAAAAACATTA
TTACGTCCACAATATGAGTATAGTATAGCATTGTAAGGTTGTATGTTTGAGTAAGACTAT
CTAAAAAAGATAAAAAAGAGATGAAGTCTAGGATTTGTTTTTCTTTTTACAGCATTGTCG
TTCAATTACCGCGTATATATGTATTTGTATTTTTAAAATTTAGCGTATATTTAGCTGCAT
TTAAAGATAAAATGGGCTACTAAAGAATCCTCCCCAACTAACTGCTAGTCTAAATAGTAT
TCTTCACTACTGTAACAAAGTTGCATTTCTTCTTTTAGTGACTGGCATCACTTCTTAGAA
TGTAGTTGCTAATTTTAACTTGTAAAGCCAAAACTATACACAAACAATGGAAAGGATACC
CA