- Region 'REG00001520'
Cis-regulatory Region
Name
Cirobu.REG.KhC7:1784136-1786244|En
Short name
En –2085bp/+24 bp (Stolfi 2011)
Region ID
REG00001520
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(complex_region)
Author
Alberto Stolfi (2020-11-21)
Annotator
Marion Gueroult-Bellone (2020-11-21)
Curator
Marion Gueroult-Bellone (2020-11-21)
CONS00001627: p.Cirobu.REG.KhC7:1784136-1786244>unc76:YFP(Venus)
1,784,1361,786,244
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [1,784,136 / 1,786,244] on scaffold KhC7
This 2.1kb regulatory sequences spans from –2085 to +24 bp from the translation start of En.
Show sequence
Length: 2,109
gggcaaccttgtatttcgcttcattttaaattcaccacccgccttggtctttggaaataa
aacacttttatagcggtgttgttttacgattactacttaaacggctaaaataatttcgaa
agtaaaaaaagagttaccattttgaaatagtttagtagaaaaatagtatttttcttatta
aaaaataagggaatatactcgctctgcctttgcgcgaaaaaataattggcgttcagaatt
aatggatcaaaatatattaaatcagaagtaatcataaattaagtccaaccaacaatatct
aatacaaagacagatattttaccaagattcacaagtatctaatttaaataaattcaactt
gaatctttcaggaataattaatattacgcttaaagtttacacatcatttacgtccttcac
ataaatatacttcgtcacaggcgagtatgctgtaactgacttgtgatcactaggaacgcc
gcttccaatctgagcttcctcctttttcttgagttccgccattttgtaaaattcgttgac
tcggttaaaccgattgcgtaatcgttctcaagaagcgtgaaatgtcattttgtgaattct
gaacaaattaaaaggaaaatatttgttgctgaactaggctattaaatcgttgaattattt
gtataaattaagtagcgaaatacacattatttaaactttattctcgggtacatacaaaac
actgtaatttggtttgagctgcttgtacaataagagcttttttctgatcaatttattgtt
gtggcactaatgatggtggtctgtaatcaatacgtgtaaggtgctcttaaggtttgctga
tttgaggtgtagtttgttccatctttagatttctaaattcagtgttatagcggcgtgccc
gttttgtatatagtagtgttggggtaaaatgggacaccgttttactctattttctcgtct
tatttagtagtaatcaaataacattcaaagaaatataaaaccgtattcttacgactacca
ttgaccgttggtaattgtttaaaacaagatcagggtattcggatattctgggctaaaggt
gtcccgtctccccccaccaccaaaaaatgttattaattgttaaaatacgattggagtaga
atattattagctgacggtattcattcgactcagcagtgtatcgccttctcctatataccg
cccactccaatacaccaacaaaactttgaccccggaaatgttcaagtacttcatttaagc
gtataacattcaatctggctgcgttaatcactatctggttcaattttagccatgttaaac
atcattcctatgggagttggggtgactttgttcttgtgtgttgtctcagtgacaaatttg
aaattaagtaacttaagagttctaatccagattggattttgaattccctaccgtggcgca
atcggaacgaccgcagaattaatcgagaattaaacgacgcttcaattaatattggccaaa
gttcacaactggcattatagattggagttcatcacacttttgccagcagatcggtttgaa
tttgcaaatggtcagaaatctagcgattgttcaaactgtagttaactttcgctgcattaa
attctcattcgtcggatgaacaatgtgtgtgtttaaacccacaaaaaacttgtggaataa
tttgacgtacatcatcgttcattatcgcgaactatcgaagcgcacacgcccaacaacgac
ccggaacaatcgttgccacttttcctatagatcagttcacatttagagcagtaattagcg
attgatttaacacgatgctgtgggaatttaggcggcgtgtgtttgtctgataaatgtgac
ctttcacggttcgttctaagtgttatgatagacgtgtttcgcgaattgtttgataaatat
agtagggtgggggaagatgggacaccttttcattcaattttcttgacccagttggtactc
acttggtagtaaacaaaaacatacaaagaattataaaactgcatcctcacgactcccaga
ccgttgttagttctttaaaagacgatcaggatattcggatattatgtgctaaacgtgtcc
catctttcC
