- Molecular Tool 'Ci-bmp2b::Ci-Tbx6b' >
- Region 'REG00001507'
Cis-regulatory Region
Name
Cirobu.REG.KhC3.3537160-3539078|Mesp
Short name
Mesp driver (1916 bp from ATG)
Region ID
REG00001507
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(complex_region)
Author
Alberto Stolfi (2020-11-09)
Annotator
Marion Gueroult-Bellone (2020-11-09)
Curator
Marion Gueroult-Bellone (2020-11-09)
This Mesp driver is -1916 bp from the ATG start codon. This is the original Mesp (not minimal) driver. It is what has been used in the Levine and Christiaen labs for most studies. This cis-reulatory sequence is active in the B7.5 lineage.
CONS00001650: p.Cirobu.REG.KhC3.3537160-3539078>PH::GFP
CONS00001649: p.Cirobu.REG.KhC3.3537160-3539078>LacZ
CONS00001648: p.Cirobu.REG.KhC3.3537160-3539078>H2B::GFP
CONS00001647: p.Cirobu.REG.KhC3.3537160-3539078>H2B::CFP
CONS00001646: p.Cirobu.REG.KhC3.3537160-3539078>H2B::mCherry
3,537,1603,539,078
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [3,537,160 / 3,539,078] on scaffold KhC3
Show sequence
Length: 1,919
CATAATACAAGTTTCAAATCAACCTGTTTTGTTAAAATGTTTTTGTGAATTACATAACCA
CACGATTCTGAATTACCATTATATCTGTAGGAGGTGTCTAATTAGTTCGTTTATCGCCGC
ATGAAACGGGCAAAGTCATTATCGCCTTTAAGTTTCAAAGGCGAAATATCCGTCGCTAAT
GACTTGTTGTGACAATTCTATTCGCTGGATTTTCGTAATTAATCACATTTCAAATGTAAA
ATCTGATGCATCAGCAAATTTTGAAGCTGGACCGTTCCTGTAACGCTTTTGTTTGGTCAG
ATAATACGACGCAAGTATTTTATGATATACAAACAAACAGCCTGTTTCCATTAGCCATAT
AGTTTATTGTGGAGTGATTGACAGAATTGCGATGTTGATTTAACGATGATTGTTTTTAAA
ACAAACACAAAGTTTACTGTGACATTAGACCCACATTTTCCGAAATCTTCCCACTGAAAG
CACTGCCGATTCATAATTGATTAATACTTCAGTTTTGGTGGGAAACTGTCAGTGAATGAA
TCAATGTAACTTACTTTATTCTCGCGTGGCCGGAAAACGACAGTCGTTTTCACACGGGTG
CTCTGTATTAGCTTACGAGTTACCATGTATGTTACTTTGTGGGTGTCTACGTTTTTGGAA
TTTTTCCATTTTTTGTGGCTGATAAGATTGATCGAAAACAGGGGAATACAAACTTCGACA
AGTATGACTTATTTGTAGTCGTGTATTTGTACGACTTGTGCGTATATCAAATATTATTCA
CTAGCAGTTGAAGTATATTTGCTCACATGATGTACAATCATAGGATACCCCCGACAAACT
TCTGTGTCTGCTGCTGTATACTCATTACTTCCAAGTTAATTATAAACGTTGTCAATACAG
AGACACTCGCAAACAAAGCCGCCAACAATATGGGACACTGATATTTTTATTAAAGTCTTG
TTACCTAAAATAGACACTTTATAATCCCATGAAAATACATGAAAGAGAATTTGTCTAATG
TTGTAAAGATATAGCCGAGTTTGCGCTAAAGTTTGTATGTATGTGGTTTATCAATAAGCA
TGGTCTAACGACCGCCGCGTTTTCGGTAAGTCGGGTTTATCGTTTTGGAGCATCCATAGG
ATCTTTCCCTACAATAGGAGAGCTAAATAAACCTTCAATTATGATGACTTCGCAAAGTTT
TGTTCACCGTCCATTTTTAAAGGTCTACTTATATAAGTTGGATATTTGGTTTGCTCAAAT
ACGACTTCGGTTGCACAAAGAACATTATATGTGAATGCATCGGCTATGTAAAGGTTTAGG
TGCGGTCTTCATTAGGATCAGTGTGCAAACATGTATTTAGTAGAGCGGGGTCATACGAAG
AAGGAGACGGCATCACTTATAAACGAAGTTGGGTTTAAAATAGCTGAATAATCATTTATC
AGGAGTTCAACGGTAAACTTTGATAATTTGTGAAGCTTATAAAAAGTTAGGGCAGGCGGT
GGGACGTTTTCTATTTTATTCCAATGGAAACAGATGAAACGTTAAGCTTGTATGCAATCT
TCGTATAAGAGAATACGAAAAATACCGATTTGTTGCAATAGAATGATTAAAAATGCATAT
TTTTCTTCATATTTAATAAGTATAATTTTATTTTATAGTTTTATGTCGTTTTTTTAACTT
TCGTGAATTGCTAATTGTTTGTAATAAAATCTGGTGTATCTATCCATCTTTGAAGTGGTT
CGCACTTGGATGAGATAAAAATGTCAGAAAACGGTTACAGCACCAAAAACGAGTATGAGA
ACCCGGCTTTCAAAAATGACGATGAAACGGAAATGAAGGATTTCAAAAAAGATGATATTG
AAAAAGCATCAGAGGTTCCGGATGGTTACGATATCGGCATGGGACGTCACGTTGAACCG
