- Gene 'Phmamm.CG.MTP2014.S1...' >
- Region 'REG00001452'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S411:109256-109999|ELK
Short name
n/a
Region ID
REG00001452
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
no_output
Author
Damien Gailly (2018-05-30)
Annotator
Marion Gueroult-Bellone (2018-05-30)
Curator
Marion Gueroult-Bellone (2018-05-30)
This 744bp sequence, located 6kb upstream of ELK (S411.g08422), is not able to drive reporter gene expression.
CONS00001474: p.Phmamm.REG.CG.MTP2014.S411:109256-109999>LacZ
109,256109,999
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [109,256 / 109,999] on scaffold S411
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : acccttaaacgcctcgaact Reverse : ttcctgcctgtctttgtgttt
Show sequence
Length: 744
acccttaaacgcctcgaacttcccatagaaatgactgacgtgatatttgaacaagcgttg
gcaggaaacacaaagttgggtatttttcgtaatcgtgtcaacaacagcttacgacagctg
gcgttcctcgtccttagttttgacgcgcatggccatccacactcgtaggaaagggcctct
aattgagacgtggccattatcaccagcagctacaatagtaagtcctccccagcgaaaagg
aaatgaaatcatcagcagggctccaactgctaagaaaagcagctgtaatcatcgagtgcc
gagcagcatatctatccgtgaatgccctgctgtcgacagaagccgtccgccggaaaagga
aaaaggcgtttaaagaaacaaagtttcctcccggtgcctttctcgctggcgcgcgggtct
ttgtccgcagttgcgttctctgctgatttgtttgcgcttcgccgcgtgtacttccgctgt
ttcgacggtcggagctcgcttgaagggctttcgtgttgatcggcaaaaggaatatcgcca
cagacgtgcgagtttgtttcatctccaatagttggtaaggcgtacgagttgctagtcgaa
agtgagttgcccagttacggcaccgaagacaggcagtccgccataaagacggtagcagtt
tggttcaagttctgacttgcgtgtcgccgtatcaagttcagtagccagacaggaacgact
aacaaacacaaagacaggcaggaa
