Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S411:119129-121273|ELK
Short name
n/a
Region ID
REG00001451
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(enhancer)
This 2145bp sequence, covering upstream, the first exon and part of the first intron of ELK (S411.g08422), drives reporter gene expression.
CONS00001473: p.Phmamm.REG.CG.MTP2014.S411:119129-121273>LacZ
119,129121,273
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [119,129 / 121,273] on scaffold S411
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : aagtgatttcgacgcaaggt Reverse : ctcactcctattgcgaagca
Show sequence
Length: 2,145
aagtgatttcgacgcaaggtttaatgcatgtctgttttcggatgcgcatccctgcatgta
aatgatgcggcgcgattttttactaatcacatgatacagagacacctctggttggtcaca
aacccgcttaacctgacaagaacccgttactgcctgacgagcggaagtcgctgttagctt
ttgcacgcaatcctgtaccagggaacaggcagtgtctattactgtgggaatctacgtctc
cctgtgtcaaaacgcacggcgtcttccgacaattctccgtctgtcatcgcgccctaaata
acgccaacaaatcaaacacctacctgggtcttaataacacggggcctctcacctacgtgg
ccacaacaagacttgacagacagcccctaaataaggtcctgtctatgaccaggtgacgac
caagcatcacagaggttaagcttctggtgctacctatttttagacttagaccgctgcaat
atgccggcttgcatatatatatatattgcttgatagcgctttcattggtcgagttgtttg
tggcacttgttgtgtcgtcagcagcgcctacctttttacgtcacgccagtgcttcgggca
ctcctgcgtgcacgcgagacttattcattcctaaataagtaaatggaatcttcagcgcca
ggggcaaaatcaaatttccatgtcctcggttttagtgaggcacgcttccgctgcgcttaa
accgtattctaaagcttaggaggagcacttggcgtattgaaacgtcttatcggagtttaa
ttacgaccgcaatgttagcgtgtttccccttttcgtcgtttcgttttcacctaaattcgc
taatttggtggtgaactttattatttatcacagctttttggttgttagaagattttctaa
aaagaaaaattatgcaaaactgtttgttaggtatttttttggtttatcccccccccctta
cgaccgcaatgttagcgtgtttccccttttcgtcgtttcgttttcccctaaattcgcggg
tttgttggtaaagtttaataccaatacttgttctgttgtttttgaaagatttcctaaaaa
gaaaaattatgtaaaactgtttgttaggccttatgttgtttaaaggaaacatttctgaat
tcaagtgcctttgttttgcattgagcattattagcgtttacaattacaaactgatatgta
tcaaacacaaatgtattatcaccatcattagcatagaattttcgcaaaccgcacaatgcg
ttagcccggacgatccggattggcgctaaacagcgataacatttcagtagcgcttcccgt
cattcgcctgtactgtgtattgtaccggggctgtcgacggattgtgaaaagtcgacgcgg
cctgccttgatttgacggcttggagctgaacagtggcttggcaaatttccgcgccctttc
tgcgaaaaaacactacgctcccgcgagcgcctgcaattgtcacaaactccgggttgaggt
cctgtggagcaagcggcagcgtgggcggaaggaaaaccgccattaattaggcgagcacgc
cgcgctccaaccctcataatactttatggttgaagtctatttggaatggtgagcagcggc
agcttaacaggatgccgtctgtcggggccttcgctgggatcactcagccgcctgttctag
aagcctcgggatcgcctgactgcaacggtagcgccatcacagagctgcaagcgcgattcc
ctttcgggcatgcccgccacttccccgacgccccaacacctcttcccggtgtcgaattcc
cgccaggaatcgtgcgttgtagcagcttgacattatataagcttgatagcgttgtggctg
ccaatccgcaactagtgtttaaacgcgcgacagtttttatgcaatgccgcggtgcaatat
gccccgtctggtagtgatgagcacatttgaattaaataggcaaagtgtgtttaatttcac
aattaaatagacaaagtgtgtttaatttcacacaaacaattaccaggcctattgcataac
gtctacttacgttaaaaccataaaatgctttagtttgccaaatcctgggacggaaataaa
acgttttagggtttgttttaaaatctgcttcgcaataggagtgag
