- Region 'REG00001446'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S597:16901-17288|TTF1/Nkx2-1
Short name
n/a
Region ID
REG00001446
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
inactive_region
Author
Alicia Madgwick (2018-05-30)
Annotator
Marion Gueroult-Bellone (2018-05-30)
Curator
Marion Gueroult-Bellone (2018-05-30)
This 388bp sequence, located upstream of TTF1/Nkx2-1 (S597.g10419), is not able to drive reporter gene expression.
16,90117,288
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [16,901 / 17,288] on scaffold S597
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : taaccagggcaatttggttt Reverse : cgttggcgacaagacactt
Show sequence
Length: 388
taaccagggcaatttggtttcaggaagatcataatgcaacaaggattcattcacgagttt
tgacagcgaaagtgcgtcaaatgcaaaacaaatacaaaacactcgatcagtgacgccaat
cgctcagttgcacgacagacagctacaatagcccagcacttggtcaagtcgatctgtcgc
ttgctggcggcggatttacttcgaaatctttcaccgtcgtcacggcacaagtatatcaag
agacagaatgcaacaaggtgggaggggcacttgtccaaagcgcaatttaagcgaggtttg
ccggcgtgtgccgttttgggtcgactttgatctgtgatagggagcgtggcaagaaagaag
acccacaacaagtgtcttgtcgccaacg
