- Region 'REG00001445'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S597:17594-18238|TTF1/Nkx2-1
Short name
n/a
Region ID
REG00001445
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(enhancer)
Author
Alicia Madgwick (2018-05-30)
Annotator
Marion Gueroult-Bellone (2018-05-30)
Curator
Marion Gueroult-Bellone (2018-05-30)
This 645bp sequence, located upstream of TTF1/Nkx2-1 (S597.g10419), drives weak reporter gene expression in mesenchyme.
17,59418,238
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [17,594 / 18,238] on scaffold S597
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : acgctgaacaatatcggaat Reverse : acagcttttcgcctcatagc
Show sequence
Length: 645
acgctgaacaatatcggaatagctgacgatcgcgcgcaaataactgcgacaatttggggg
cacgaaaacaacgcagacggctcccgaaggcggaacaaagaaaagtattcggacgactac
aaaagcgcctgttcgaaatcgaggcccggtgattcgccaaaacgggtatgaaaacggtca
acgaggaagctcagctgctcatgagtgtccgttcgtcgcttgcacaccgcgcttcaagca
cttagagggtccttacgttgcctacgttgaagccagggcggaccacaaccgtgaggcaaa
ttacgcagggggggggggaccgcgcttcaagcacttagagggtccttctcagcctacgtt
gaagccagggcggaccacaaccgtgaggcaaattacgcatcacatcggccctgctgctgg
caaaacctaatgttttcagattgcgccaaaatcgataaacgccggtactgcgaatggaaa
agtattcgttttttttctggtggtgacatcatgttttgatgttttcagcgacgagtcaca
gcttttcatgaagcttgtagtttgtcatgcgcgcgcatttcgttcaaaatctgtataagc
gtttttctgcttgccgcaaaatggcgctatgaggcgaaaagctgt
