- Region 'REG00001444'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S597:21405-21785|TTF1/Nkx2-1
Short name
n/a
Region ID
REG00001444
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(enhancer)
Author
Alicia Madgwick (2018-05-30)
Annotator
Marion Gueroult-Bellone (2018-05-30)
Curator
Marion Gueroult-Bellone (2018-05-30)
This 381bp sequence, located in the first intron of TTF1/Nkx2-1 (S597.g10419), drives weak reporter gene expression in mesenchyme.
21,40521,785
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [21,405 / 21,785] on scaffold S597
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : tataccaaacattgggatgatgg Reverse : aacttaatttcaagtcgtccttgg
Show sequence
Length: 381
tataccaaacattgggatgatggtgctcttgcccatcatctcaagcaatcttaaagtgcg
cttggtaacacggcgtgagagcaattcgccgttaaagtagtgcgagtagtgcgcttggca
agggcggccagaggacctggagcctgctgatggaagcacacgatgacgagataagaacac
ctcgatacgtgaggaccgatgcttataattctaatattaagccattgcaatactgttgtg
tccacaagcgaggccacttacgcggccgtttccgattgaatttgaagaatccggcgcgat
aagcagcaccgaagggctcttgcatatgcccggccagctcgtgcctttgaaggagcacca
aggacgacttgaaattaagtt
