- Region 'REG00001440'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S160:17202-17589|Eph1
Short name
n/a
Region ID
REG00001440
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(enhancer)
Author
Alicia Madgwick (2018-05-30)
Annotator
Marion Gueroult-Bellone (2018-05-30)
Curator
Marion Gueroult-Bellone (2018-05-30)
This 388bp sequence, located in the second intron of Eph1 (S160.g04451), drives reporter gene expression in endoderm, mesenchyme, notochord, brain and neurones.
17,20217,589
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [17,202 / 17,589] on scaffold S160
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : aaccaacacggtctctgtagaa Reverse : aacaaacgactgcgtcacaa
Show sequence
Length: 388
aaccaacacggtctctgtagaaaccgaacataattatcgtcattgggcaagcttaatcac
acagacatgcgctggaggcgtgttcgttttcctgtagcacgctttcgggcagttgatagt
ctttcacctcatgaaaggcttccaactgtgtgtttaaagtcacagagccttctgatcatg
aaagcattgtttgtgcggatggcaaggtgatacaatcatgactaagcgtgacttctatcg
agtgcagcatgctgggcatcccgtgttctgcgcatcggtaacataaaaggcaccggccgc
atttcaaaggcaggaaacaaactttgaaatgtaatgcacaccatgatgtgcaacttttga
tggttttcttgtgacgcagtcgtttgtt
