- Region 'REG00001439'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S160:15388-15940|Eph1
Short name
n/a
Region ID
REG00001439
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(enhancer)
Author
Alicia Madgwick (2018-05-30)
Annotator
Marion Gueroult-Bellone (2018-05-30)
Curator
Marion Gueroult-Bellone (2018-05-30)
This 553bp sequence, located upstream of Eph1 (S160.g04451), drives reporter gene expression in endoderm, TLCs, mesenchyme, notochord and brain.
15,38815,940
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [15,388 / 15,940] on scaffold S160
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : ggtcagcgcaaaagaatacg Reverse : gtttgtcggtttgcaacctt
Show sequence
Length: 553
ggtcagcgcaaaagaatacgttaatgtttgcattgttgattaaaaagctggccttaaatg
taacgcaatgaagataagcaaacaaggtcttgagggaattgattgtctcggccttgtgga
gcaggacggccagcagcggcgcgagacagaaatgtttgccattaaatgtaggtgcgaaat
tgaccttttatcaagccttgactctgcctccacgggcacatcctgtatgttgcgctggca
caggtcgaaaaaagagcgcgcgtcagttaattaatcaactacagatggaagtgaagtgct
tgcctggacaaatatttgacatctgcatgtgaggtcagaggcagacgaaaaaaggtaaac
tcgtactttaactcttggttcagagatacattcctataaatacgtgcgctcagcagcacc
gacaaccagcaaaccttggcagtacaacgtaaaaacgttagcactgaacatataatttct
aaacaagatatgtcgcttataatttatccacacagagtgggaaggattagtataaggttg
caaaccgacaaac
